Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   V5118_RS13325 Genome accession   NZ_CP160483
Coordinates   2637628..2638515 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN38-MSSA1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2632628..2643515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V5118_RS13295 (V5118_013295) - 2632656..2632739 (+) 84 WP_031797553.1 hypothetical protein -
  V5118_RS13300 (V5118_013300) - 2632847..2633344 (-) 498 WP_001065268.1 glutathione peroxidase -
  V5118_RS13305 (V5118_013305) - 2633354..2633614 (-) 261 WP_001791974.1 hypothetical protein -
  V5118_RS13310 (V5118_013310) - 2633996..2634109 (-) 114 WP_011447078.1 hypothetical protein -
  V5118_RS13315 (V5118_013315) - 2634768..2636768 (-) 2001 WP_000776734.1 ABC transporter permease -
  V5118_RS13320 (V5118_013320) - 2636765..2637520 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  V5118_RS13325 (V5118_013325) braS 2637628..2638515 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  V5118_RS13330 (V5118_013330) braR 2638526..2639191 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  V5118_RS13335 (V5118_013335) - 2639217..2639417 (-) 201 WP_000604727.1 hypothetical protein -
  V5118_RS13340 (V5118_013340) - 2639615..2641039 (+) 1425 WP_000953758.1 alkaline phosphatase -
  V5118_RS13345 (V5118_013345) - 2641099..2641200 (-) 102 WP_000731972.1 SE2200 family small protein -
  V5118_RS13350 (V5118_013350) - 2641322..2641777 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  V5118_RS13355 (V5118_013355) - 2642022..2642783 (-) 762 WP_000323442.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=1021532 V5118_RS13325 WP_000143426.1 2637628..2638515(-) (braS) [Staphylococcus aureus strain BSN38-MSSA1]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1021532 V5118_RS13325 WP_000143426.1 2637628..2638515(-) (braS) [Staphylococcus aureus strain BSN38-MSSA1]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997


Multiple sequence alignment