Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | SMUFR_RS02040 | Genome accession | NZ_CP007016 |
| Coordinates | 396415..396645 (+) | Length | 76 a.a. |
| NCBI ID | WP_002275977.1 | Uniprot ID | Q8DVP7 |
| Organism | Streptococcus mutans UA159-FR | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
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Genomic Context
Location: 391415..401645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUFR_RS02020 (SMUFR_0360) | rnpM | 391984..392280 (+) | 297 | WP_002263922.1 | RNase P modulator RnpM | - |
| SMUFR_RS02025 (SMUFR_0361) | - | 392273..392575 (+) | 303 | WP_002262601.1 | YlxQ-related RNA-binding protein | - |
| SMUFR_RS11015 | - | 392596..392691 (+) | 96 | Protein_373 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| SMUFR_RS02030 (SMUFR_0362) | infB | 393124..395346 (+) | 2223 | Protein_374 | translation initiation factor IF-2 | - |
| SMUFR_RS02035 (SMUFR_0363) | rbfA | 395580..395930 (+) | 351 | WP_002262599.1 | 30S ribosome-binding factor RbfA | - |
| SMUFR_RS02040 (SMUFR_0364) | cipB | 396415..396645 (+) | 231 | WP_002275977.1 | bacteriocin class II family protein | Regulator |
| SMUFR_RS02045 (SMUFR_0365) | - | 397036..397479 (+) | 444 | WP_002263708.1 | CopY/TcrY family copper transport repressor | - |
| SMUFR_RS02050 (SMUFR_0366) | - | 397476..399704 (+) | 2229 | WP_002263707.1 | heavy metal translocating P-type ATPase | - |
| SMUFR_RS02055 (SMUFR_0367) | copZ | 399717..399920 (+) | 204 | WP_002263706.1 | copper chaperone CopZ | - |
| SMUFR_RS02060 (SMUFR_0368) | - | 400167..400988 (+) | 822 | WP_032497569.1 | Cof-type HAD-IIB family hydrolase | - |
| SMUFR_RS02065 (SMUFR_0369) | - | 401095..401586 (-) | 492 | WP_011074508.1 | YgjV family protein | - |
Sequence
Protein
Download Length: 76 a.a. Molecular weight: 7229.19 Da Isoelectric Point: 3.7781
>NTDB_id=102123 SMUFR_RS02040 WP_002275977.1 396415..396645(+) (cipB) [Streptococcus mutans UA159-FR]
MNTQAFEQFNVMDNEALSTVEGGGMIRCALGTAGSAGLGFVGGMGAGTVTLPVVGTVSGAALGGWSGAAVGAATFC
MNTQAFEQFNVMDNEALSTVEGGGMIRCALGTAGSAGLGFVGGMGAGTVTLPVVGTVSGAALGGWSGAAVGAATFC
Nucleotide
Download Length: 231 bp
>NTDB_id=102123 SMUFR_RS02040 WP_002275977.1 396415..396645(+) (cipB) [Streptococcus mutans UA159-FR]
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAACTGTTGAGGGTGGTGGTATGATTAG
ATGTGCACTTGGCACAGCTGGTTCTGCAGGTTTAGGATTTGTAGGGGGTATGGGAGCTGGTACAGTTACTCTCCCAGTCG
TTGGTACAGTATCTGGAGCGGCTTTAGGAGGCTGGTCTGGAGCAGCTGTAGGTGCTGCTACTTTTTGTTGA
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAACTGTTGAGGGTGGTGGTATGATTAG
ATGTGCACTTGGCACAGCTGGTTCTGCAGGTTTAGGATTTGTAGGGGGTATGGGAGCTGGTACAGTTACTCTCCCAGTCG
TTGGTACAGTATCTGGAGCGGCTTTAGGAGGCTGGTCTGGAGCAGCTGTAGGTGCTGCTACTTTTTGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
71.429 |
55.263 |
0.395 |