Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ABZP31_RS12855 Genome accession   NZ_CP160437
Coordinates   2749353..2750234 (-) Length   293 a.a.
NCBI ID   WP_010699894.1    Uniprot ID   -
Organism   Acinetobacter sp. FL     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2744353..2755234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS12835 (ABZP31_12835) miaB 2745784..2747241 (+) 1458 WP_005018411.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  ABZP31_RS12840 (ABZP31_12840) - 2747280..2748377 (+) 1098 WP_005018410.1 PhoH family protein -
  ABZP31_RS12845 (ABZP31_12845) ybeY 2748386..2748865 (+) 480 WP_005018409.1 rRNA maturation RNase YbeY -
  ABZP31_RS12850 (ABZP31_12850) - 2748957..2749337 (+) 381 WP_227548706.1 hypothetical protein -
  ABZP31_RS12855 (ABZP31_12855) tonB2 2749353..2750234 (-) 882 WP_010699894.1 energy transducer TonB Machinery gene
  ABZP31_RS12860 (ABZP31_12860) - 2750478..2751158 (+) 681 WP_005024481.1 hypothetical protein -
  ABZP31_RS12865 (ABZP31_12865) - 2751326..2752039 (+) 714 WP_248133715.1 DUF3108 domain-containing protein -
  ABZP31_RS12870 (ABZP31_12870) - 2752132..2752707 (+) 576 WP_005407147.1 xanthine phosphoribosyltransferase -
  ABZP31_RS12875 (ABZP31_12875) wrbA 2752746..2753339 (-) 594 WP_005018403.1 NAD(P)H:quinone oxidoreductase -
  ABZP31_RS12880 (ABZP31_12880) - 2753452..2754696 (+) 1245 WP_005024473.1 YhjD/YihY/BrkB family envelope integrity protein -

Sequence

Protein


Download         Length: 293 a.a.        Molecular weight: 32951.51 Da        Isoelectric Point: 8.3816

>NTDB_id=1021136 ABZP31_RS12855 WP_010699894.1 2749353..2750234(-) (tonB2) [Acinetobacter sp. FL]
MLKKIILPGGIGLAWWQDPIFMGALLLAVILHSAILTLHFAMPDPEAAASKEIAVSIRPSSEQVKDADYLAQADQQGSGR
FREAHRISSQLPASSQQQSAGEQQQETLQQMHQQPQIQFEDKVLMTIMSWRKEAEQNQRKKALEELQSQFQAKAATAASL
EAQYLQRQQDFSRQQRIKTVDGIQAKQDAAAAYLDKFREKVELYGNRYYPQQAKAERLTGEVQLMVILNAQGGIRAIRLL
ESSGHTILDEAAKASVRKGAPFGRFDAGMKDISELRIVRTWRFDPAEAEFEVK

Nucleotide


Download         Length: 882 bp        

>NTDB_id=1021136 ABZP31_RS12855 WP_010699894.1 2749353..2750234(-) (tonB2) [Acinetobacter sp. FL]
ATGTTGAAAAAAATAATTTTACCTGGTGGGATAGGTCTGGCTTGGTGGCAGGATCCGATTTTTATGGGTGCTCTGTTGCT
GGCTGTCATTTTACATTCGGCGATTTTAACTCTGCATTTTGCAATGCCAGATCCAGAGGCTGCTGCCAGTAAGGAAATCG
CTGTCAGCATTCGTCCGAGTTCTGAGCAGGTCAAAGATGCCGACTATCTGGCACAGGCAGACCAGCAGGGTTCAGGCCGC
TTTCGAGAGGCTCACCGTATCTCAAGCCAGCTACCGGCCAGTTCACAACAACAGAGTGCGGGTGAGCAGCAGCAGGAGAC
TTTACAGCAGATGCACCAACAGCCTCAAATACAGTTTGAAGACAAAGTCCTGATGACAATCATGAGCTGGCGCAAAGAAG
CGGAGCAAAACCAGCGTAAAAAGGCTTTAGAAGAATTACAGAGCCAGTTTCAGGCTAAGGCAGCAACGGCTGCCAGTCTG
GAAGCCCAGTATTTACAGCGTCAGCAGGATTTCAGCCGTCAGCAGCGTATCAAAACGGTGGATGGAATACAGGCCAAGCA
GGATGCAGCAGCTGCCTATCTGGACAAGTTCCGTGAAAAAGTTGAACTCTATGGTAACCGCTATTATCCGCAGCAGGCTA
AGGCTGAGCGCCTAACAGGAGAAGTGCAGCTTATGGTCATCCTGAATGCTCAAGGCGGGATACGTGCAATCCGGTTATTG
GAAAGTTCAGGACATACCATTCTAGATGAGGCAGCTAAGGCTTCTGTACGTAAAGGTGCGCCATTTGGGCGATTTGATGC
AGGTATGAAAGATATTTCTGAACTACGCATTGTACGGACGTGGCGATTCGACCCGGCCGAGGCTGAATTCGAAGTAAAAT
AA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(206-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

72.014

100

0.72

Multiple sequence alignment