Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ABZP31_RS01395 Genome accession   NZ_CP160437
Coordinates   307309..309534 (-) Length   741 a.a.
NCBI ID   WP_367156873.1    Uniprot ID   -
Organism   Acinetobacter sp. FL     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 302309..314534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP31_RS01375 (ABZP31_01375) - 302573..303526 (-) 954 WP_034686533.1 DnaJ C-terminal domain-containing protein -
  ABZP31_RS01380 (ABZP31_01380) - 303682..304143 (-) 462 WP_005405863.1 DUF2147 domain-containing protein -
  ABZP31_RS01385 (ABZP31_01385) - 304468..305343 (-) 876 WP_248134796.1 Hsp33 family molecular chaperone HslO -
  ABZP31_RS01390 (ABZP31_01390) - 305393..307225 (-) 1833 WP_248134798.1 cation:proton antiporter -
  ABZP31_RS01395 (ABZP31_01395) priA 307309..309534 (-) 2226 WP_367156873.1 primosomal protein N' Machinery gene
  ABZP31_RS01400 (ABZP31_01400) gspF 309690..310895 (+) 1206 WP_034683416.1 type II secretion system inner membrane protein GspF -
  ABZP31_RS01405 (ABZP31_01405) gspG 310933..311370 (+) 438 WP_005023137.1 type II secretion system major pseudopilin GspG -
  ABZP31_RS01410 (ABZP31_01410) - 311707..312042 (+) 336 WP_026444089.1 hypothetical protein -
  ABZP31_RS01415 (ABZP31_01415) lnt 312120..313679 (-) 1560 WP_151829005.1 apolipoprotein N-acyltransferase -
  ABZP31_RS01420 (ABZP31_01420) - 313676..314515 (-) 840 WP_034684930.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84175.33 Da        Isoelectric Point: 9.0754

>NTDB_id=1021117 ABZP31_RS01395 WP_367156873.1 307309..309534(-) (priA) [Acinetobacter sp. FL]
MPSSSHNNCCIYRVRVAVPVHLYDSFDYLLSAEQYLQAEVGARVAVSFGRQNLIGIIVEKISPDVMPDPRIKLKAITELL
DKEAIIDSKVLSLLTWSAQYYQFPLGEVMQCALPGLLRQGKPLNLLARVWKVVQPDAEQLLKRSIKQQDAYKILKLHAAG
TTEDILNLSGVETATLKALEKKEIVRCELTAINTTPEPVQLAQMPLTPNEDQHKAIQRILKSLKKFQAFLLDGLTGSGKT
EVYLQVMYEVLKQGKQILVLVPEIGLTPQTISRFKSRFNVDIVLLHSGLSESKRLQAWQHAQTGKASIILGTRSAIYTSL
PRLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSLDSYHLVEQNKLTRLELNQRAGNAVLPKMQL
IDLKVARKQHGISEQLIKQIQQRLDKKEQVLVFLNRRGYAPVLVCNHCGWQANCPHCDAHFTLHTQPYNHLHCHHCGSIH
RVPESCPECQQTTLKTLGMGTAKVEETLTELFPDFDVIRVDRDSTSRVGQWDRIYQRIHQSQPAILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSFDFRAPERTAQLIIQVAGRAGRGDRRGEVYLQTLRPDHPLLTTLIEKDYHAFAKQALIERQQAQL
PPYRYTVLVRADSRNQQYSQEFLAEIARKLRELAGSQVDIWGPIPAPMERKAGRYRAHLVLLSADRAQLHFYLRQWWAMV
VQQSRQHQLKLSIDVDPQELS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=1021117 ABZP31_RS01395 WP_367156873.1 307309..309534(-) (priA) [Acinetobacter sp. FL]
ATGCCTAGCTCGTCCCATAATAACTGCTGTATATACCGTGTCCGGGTAGCTGTACCTGTTCATCTCTATGATAGTTTTGA
CTATCTGCTTAGTGCCGAACAATACTTACAGGCAGAAGTCGGTGCGCGGGTAGCAGTATCTTTTGGACGGCAGAATCTGA
TTGGTATCATTGTAGAGAAAATTTCTCCCGATGTTATGCCTGATCCGCGTATCAAACTTAAGGCTATTACTGAGCTGCTC
GACAAGGAAGCCATTATAGACAGCAAAGTTTTAAGTTTGTTGACATGGTCTGCACAGTATTATCAATTTCCTTTGGGTGA
GGTAATGCAATGTGCTCTACCCGGCCTGTTGCGTCAGGGTAAACCGCTAAATCTGCTGGCTCGAGTCTGGAAGGTGGTAC
AACCTGATGCAGAACAGCTGCTCAAGCGTTCAATCAAGCAGCAAGATGCTTATAAGATTTTAAAATTACATGCAGCCGGT
ACAACAGAAGATATCCTGAATTTAAGTGGTGTTGAAACTGCTACCTTAAAAGCTCTTGAAAAAAAAGAAATCGTCCGCTG
TGAATTAACAGCAATAAATACCACGCCTGAACCGGTGCAGCTGGCACAAATGCCGCTCACACCCAATGAAGATCAGCACA
AAGCAATTCAGCGTATTTTAAAATCCTTGAAGAAATTCCAGGCCTTCTTACTTGATGGTTTGACTGGTAGCGGCAAAACA
GAAGTTTATTTGCAGGTGATGTACGAGGTACTAAAACAGGGCAAGCAGATATTGGTTCTGGTTCCCGAAATCGGGTTGAC
ACCTCAGACCATTTCCCGGTTTAAATCACGGTTTAATGTAGATATTGTACTATTACATTCTGGTTTGAGTGAATCCAAAC
GTTTGCAAGCATGGCAGCATGCCCAAACCGGCAAGGCTTCCATTATTCTCGGAACCCGTTCAGCAATTTATACGTCGTTG
CCCCGGCTGGGACTGATTATTCTGGATGAGGAGCATGATCTGTCATTCAAGCAACAGGAAGGCTTTCGCTACCATGCCCG
TGATGTAGCTCTCTACCGTGCCCATCTGGAAAACTGTCCGATTATTCTTGGCTCAGCCACACCCAGTCTGGATAGCTATC
ATCTGGTAGAACAAAATAAACTGACACGACTGGAACTTAACCAGCGGGCTGGCAATGCGGTCTTACCCAAAATGCAGTTA
ATAGATCTGAAAGTAGCCAGAAAACAGCATGGAATCAGTGAACAGCTCATCAAGCAGATTCAGCAGCGGCTGGACAAAAA
AGAACAGGTGCTAGTTTTTTTAAACCGGCGTGGTTATGCGCCGGTGCTGGTCTGTAATCATTGTGGCTGGCAGGCCAACT
GCCCCCATTGTGATGCGCATTTTACTCTGCATACACAGCCCTATAATCATCTGCACTGTCATCATTGTGGTTCCATTCAT
CGTGTACCGGAAAGCTGTCCCGAATGTCAGCAAACGACCTTAAAAACGCTCGGAATGGGCACTGCCAAGGTTGAAGAAAC
CCTGACTGAGCTCTTTCCAGATTTTGATGTAATTCGTGTGGACCGTGACAGTACCAGCCGGGTTGGCCAATGGGACCGTA
TCTATCAGCGGATTCATCAAAGCCAGCCTGCTATTTTACTCGGTACCCAAATGTTAGCCAAGGGCCATCATTTTCCCTAC
GTGACCTTGGTTGCGATTCTGGATATTGATGCCGGACTGCTCAGCTTTGATTTTCGTGCGCCGGAACGTACAGCCCAGCT
CATCATTCAGGTAGCTGGTCGCGCTGGCCGTGGAGACCGCAGAGGCGAAGTCTATCTACAAACATTAAGGCCTGATCATC
CACTGTTAACTACATTGATCGAGAAAGACTACCATGCTTTTGCCAAACAAGCGCTCATCGAGCGCCAGCAGGCACAGCTG
CCGCCTTATCGTTATACGGTACTGGTACGAGCCGACTCCAGAAACCAGCAATACAGTCAGGAATTTTTAGCTGAAATTGC
CCGTAAGCTACGTGAACTTGCAGGTAGTCAGGTTGATATCTGGGGCCCTATCCCTGCCCCTATGGAGCGTAAGGCGGGTC
GCTATCGGGCCCATCTGGTCCTGCTTTCAGCTGACCGGGCACAGCTGCATTTTTATTTACGGCAATGGTGGGCGATGGTA
GTACAACAGTCACGACAGCATCAGTTAAAACTGAGTATTGACGTTGACCCGCAGGAACTCAGCTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

Type III restriction enzyme, res subunit (ResIII)

(207-369)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

75.51

99.19

0.749

Multiple sequence alignment