Detailed information NTG1020982

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM52_RS05185
• Genome accession: NZ_LS483367
• Coordinates: 1006999..1008069 (+)
• Length: 356 a.a.
• NCBI ID: WP_012766932.1
• Uniprot ID: A0A9X9GBX6
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1001999..1013069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM52_RS05165 (NCTC5371_01050)	-	1002721..1003368 (+)	648	WP_065957249.1	response regulator transcription factor	-
DQM52_RS05170 (NCTC5371_01051)	-	1003352..1004527 (+)	1176	WP_111681699.1	HAMP domain-containing sensor histidine kinase	-
DQM52_RS05175 (NCTC5371_01052)	-	1004652..1005074 (+)	423	WP_003058336.1	cupin domain-containing protein	-
DQM52_RS05180 (NCTC5371_01053)	-	1005105..1006349 (-)	1245	WP_111681700.1	peptidoglycan bridge formation glycyltransferase FemA/FemB family protein	-
DQM52_RS05185 (NCTC5371_01054)	xerS	1006999..1008069 (+)	1071	WP_012766932.1	tyrosine recombinase XerS	Machinery gene
DQM52_RS05190 (NCTC5371_01055)	-	1008146..1008586 (+)	441	WP_015017003.1	NusG domain II-containing protein	-
DQM52_RS05195 (NCTC5371_01056)	-	1008657..1009607 (-)	951	WP_003062453.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
DQM52_RS05200 (NCTC5371_01057)	-	1009597..1009914 (-)	318	Protein_963	FAD:protein FMN transferase	-
DQM52_RS05205 (NCTC5371_01058)	-	1009919..1010407 (+)	489	WP_012766936.1	Gx transporter family protein	-
DQM52_RS05210 (NCTC5371_01059)	-	1010466..1011413 (-)	948	WP_015017008.1	sensor histidine kinase	-
DQM52_RS05215 (NCTC5371_01060)	braR	1011410..1012075 (-)	666	WP_003060151.1	response regulator transcription factor	Regulator

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41385.62 Da
• Isoelectric Point: 9.5512

>NTDB_id=1020982 DQM52_RS05185 WP_012766932.1 1006999..1008069(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=1020982 DQM52_RS05185 WP_012766932.1 1006999..1008069(+) (xerS) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5371]
ATGAGACGTGATTTATTACTCGAAAAAATAGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGAGTCCCTAATCGCATGGACGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCTCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCACAGGTTTTGGTTAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (181-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A9X9GBX6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806