Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ABZ559_RS03765 Genome accession   NZ_CP160400
Coordinates   749556..751334 (+) Length   592 a.a.
NCBI ID   WP_367007275.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 744556..756334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS03745 (ABZ559_03745) - 745059..746801 (+) 1743 WP_367007274.1 ABC transporter ATP-binding protein -
  ABZ559_RS03750 (ABZ559_03750) - 746999..747148 (+) 150 WP_018375108.1 hypothetical protein -
  ABZ559_RS03755 (ABZ559_03755) - 747265..747711 (+) 447 WP_273414783.1 MarR family winged helix-turn-helix transcriptional regulator -
  ABZ559_RS03760 (ABZ559_03760) rcrP 747752..749566 (+) 1815 WP_018375110.1 ABC transporter ATP-binding protein Regulator
  ABZ559_RS03765 (ABZ559_03765) rcrQ 749556..751334 (+) 1779 WP_367007275.1 ABC transporter ATP-binding protein Regulator
  ABZ559_RS03770 (ABZ559_03770) - 751807..753441 (+) 1635 WP_367007276.1 urocanate hydratase -
  ABZ559_RS03775 (ABZ559_03775) - 753458..754516 (+) 1059 WP_367007277.1 ATP-binding cassette domain-containing protein -
  ABZ559_RS03780 (ABZ559_03780) - 754485..755165 (+) 681 WP_367007278.1 methionine ABC transporter permease -
  ABZ559_RS03785 (ABZ559_03785) - 755187..756056 (+) 870 WP_367007279.1 MetQ/NlpA family ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 65632.90 Da        Isoelectric Point: 5.8511

>NTDB_id=1020927 ABZ559_RS03765 WP_367007275.1 749556..751334(+) (rcrQ) [Streptococcus sp. ZY19097]
MENKEKTSFYNRLKPYIKGFQLPFILAVIGAIISAIITVIGPDKLKEITNLITDGLKMSSDGTFPGIDLIEVGKVAMNLA
ILYAIAAIVGYVQSFTVATIIQRFSQRLRRAIQTKINKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVISTML
LLGSIYMMFHSNVTMALTAIGSVLLGFVLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSQAFKK
LNTNLYQSMWKSQFLSGIMMPLMIFVGNFGYVMVCVVGAIKVIDGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQLQSAS
AAMSRVFEFLEEDEMEDETHKPQQLTQVKGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGTITIDGVDTRLMKREEVHDQFSMVLQDTWLFEGTIKENLIYNQKQITDEQVVAAAKAVGVHHFIKTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMTQKGFYADLYNSQFTESAA

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=1020927 ABZ559_RS03765 WP_367007275.1 749556..751334(+) (rcrQ) [Streptococcus sp. ZY19097]
ATGGAAAATAAGGAAAAAACATCTTTCTATAATCGATTGAAGCCTTACATTAAAGGGTTTCAACTTCCTTTTATCCTTGC
TGTGATTGGGGCAATTATTTCTGCCATTATCACAGTTATTGGACCAGATAAACTAAAGGAAATTACAAACTTAATAACTG
ATGGCTTAAAAATGTCCTCTGACGGAACTTTTCCTGGAATAGATTTGATAGAAGTTGGAAAAGTAGCCATGAACTTAGCT
ATTCTTTATGCAATAGCTGCTATTGTAGGCTATGTACAAAGTTTTACTGTTGCAACCATTATTCAGCGCTTTTCGCAACG
TTTACGTCGAGCTATTCAGACTAAAATCAACAAGGTTCCACTCAACTATTTTGATAGTCATTCCCAAGGTGACACACTTT
CTCGAGTGACTAATGACGTTGACCTCTTAGGTCAATCCCTCAACCAAAGTTTGGGGACTTTGGTAATCTCTACCATGCTT
CTTTTGGGCTCAATCTACATGATGTTTCACTCAAATGTCACTATGGCTCTGACCGCAATAGGATCTGTTCTTTTGGGATT
CGTACTGGTTGTAGTCATCATGGGTTCCTCACAGCCTTTGTTCAAACGTCAACAAAATAACCTTGCTGCGGTTAACGGCT
ATGTAGAAGAAATTTACTCTGGACACAATGTAGTTACTAGTTATAATGCCTCTGAAGAAACCAGTCAAGCCTTCAAAAAA
CTTAATACTAACCTCTATCAATCTATGTGGAAATCTCAATTCCTGTCAGGAATTATGATGCCTTTGATGATTTTTGTTGG
GAACTTTGGTTATGTTATGGTTTGTGTGGTTGGGGCCATCAAGGTTATTGACGGAGATATCACCATGGGTGATGTTGTTG
CCTTTATGACTTACGTTCGTATCTTTTCACAACCATTATCTCAGATCGCGCAAGCCTTTACCCAACTACAATCAGCTTCA
GCTGCTATGAGTCGTGTCTTTGAATTTCTTGAAGAAGATGAAATGGAAGACGAAACACATAAACCACAGCAATTGACACA
GGTCAAGGGAGAGGTTGCTTTTGACAATGTCTTCTTTGGTTATTCTAAAGATAAAACCATTATCCATGATTTCTCTGCTG
TGGCCAAACCAGGTCAAAAAGTAGCTATTGTAGGTCCAACAGGTGCTGGGAAAACAACCATTGTTAACTTGCTTATGAAG
TTTTATGAGATTGATAAAGGAACCATTACCATTGATGGGGTGGATACACGGTTGATGAAACGTGAGGAAGTGCATGATCA
ATTTTCAATGGTACTTCAGGACACTTGGCTCTTTGAAGGAACTATCAAAGAGAACTTGATTTATAATCAAAAGCAGATCA
CAGATGAGCAGGTTGTGGCAGCAGCCAAAGCTGTTGGTGTCCATCATTTCATTAAGACCTTACCGAAAGGTTATGATACC
TACCTGGATGACTCTGTCACCTTATCGGTCGGTCAAAAGCAATTGTTGACCATTGCGCGTGCTCTCTTGAAAGATGCTCC
GTTGCTTATCTTGGATGAAGCAACATCATCTGTAGATACGCGTACCGAAGAACTTATCCAAAAGGCTATGGACAAGTTGA
TGGAAGGGCGTACTAGCTTTGTCATTGCTCACCGCCTGTCAACTATCCGCAATGCGGATTTAATCCTTGTGATGAAAGAT
GGTAATATCATTGAGCAAGGTAACCATGATGAACTAATGACACAAAAAGGTTTCTATGCCGATTTGTACAACAGTCAATT
TACAGAAAGTGCTGCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(370-516)

ABC transporter transmembrane region (ABC_membrane)

(24-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.635

100

0.726

Multiple sequence alignment