Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ABZ559_RS03760 Genome accession   NZ_CP160400
Coordinates   747752..749566 (+) Length   604 a.a.
NCBI ID   WP_018375110.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 742752..754566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS03740 (ABZ559_03740) - 743330..745057 (+) 1728 WP_367007273.1 ABC transporter ATP-binding protein -
  ABZ559_RS03745 (ABZ559_03745) - 745059..746801 (+) 1743 WP_367007274.1 ABC transporter ATP-binding protein -
  ABZ559_RS03750 (ABZ559_03750) - 746999..747148 (+) 150 WP_018375108.1 hypothetical protein -
  ABZ559_RS03755 (ABZ559_03755) - 747265..747711 (+) 447 WP_273414783.1 MarR family winged helix-turn-helix transcriptional regulator -
  ABZ559_RS03760 (ABZ559_03760) rcrP 747752..749566 (+) 1815 WP_018375110.1 ABC transporter ATP-binding protein Regulator
  ABZ559_RS03765 (ABZ559_03765) rcrQ 749556..751334 (+) 1779 WP_367007275.1 ABC transporter ATP-binding protein Regulator
  ABZ559_RS03770 (ABZ559_03770) - 751807..753441 (+) 1635 WP_367007276.1 urocanate hydratase -
  ABZ559_RS03775 (ABZ559_03775) - 753458..754516 (+) 1059 WP_367007277.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 66680.55 Da        Isoelectric Point: 8.0094

>NTDB_id=1020926 ABZ559_RS03760 WP_018375110.1 747752..749566(+) (rcrP) [Streptococcus sp. ZY19097]
MLKILKRMNAKEVTMIILAIAFVCLNVFLDLKIPDYMSDITKLLSTQGTKAKDIFAWNFDAPGMRMILLSLGSFASSVIV
GFFAARTAASFSTRLRDDIFHSVLNFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGIQVVTKGPIMAIWAITKIANKNG
DWLLALIVAVAVMFLMILFLLIAVMPKQRLIQKLTDQLNSVTRESLSGIRVVRAYNAEAYQDDKFAKANDDVTNLNLFIG
RSMALLSPVMTAISSGLTLAIYWIGAHLIEDIAIPKDPTLIAGAMKDKVNLFSDMVVYSSYAMQVVMGFMMMIAVFFILP
RAIVSSGRVNEVLETEGSIPYPDKSQAQPSEKGSVEFDNVSFRYSKNSEAVLEHVSFKAKAGQTIAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGVDVRQYDHDTLHKIVGYIPQKAVLFSGDVTSNMDMGISNNSPLDDDKIWDALDLAQGRTFIEM
KEGKLKAPVAQGGSNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSRLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHQELLASNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=1020926 ABZ559_RS03760 WP_018375110.1 747752..749566(+) (rcrP) [Streptococcus sp. ZY19097]
ATGTTAAAAATCTTAAAACGAATGAATGCTAAAGAAGTTACCATGATTATCTTGGCCATTGCATTTGTTTGCTTAAATGT
TTTTCTGGATTTAAAAATTCCAGATTATATGTCTGACATTACCAAACTTTTGTCAACACAAGGAACTAAAGCCAAGGATA
TCTTTGCTTGGAATTTTGATGCACCGGGCATGCGCATGATTTTGCTCTCGTTGGGCAGTTTTGCTTCCTCGGTTATTGTT
GGCTTTTTTGCAGCTCGTACAGCAGCAAGTTTTAGTACTCGCCTGCGTGACGATATTTTCCATAGCGTTCTGAATTTCTC
AGATGCTGAGATTAAGAAATTTTCAATTCCTAGTTTATTGACTCGTACGACCAACGATATTACACAAATTCAATTGGTCT
TTACTATGGGGATTCAGGTTGTAACAAAAGGTCCAATTATGGCAATTTGGGCGATTACTAAGATAGCCAATAAGAATGGT
GACTGGTTGTTAGCCTTGATTGTTGCTGTTGCGGTCATGTTCTTAATGATTCTCTTCCTCTTAATAGCAGTTATGCCTAA
GCAACGTCTCATTCAAAAATTGACTGACCAATTAAATAGTGTAACTCGTGAGTCTTTATCAGGTATCCGAGTAGTTCGTG
CTTATAATGCTGAAGCCTATCAAGATGATAAATTTGCCAAAGCGAATGATGATGTGACTAATCTTAATCTCTTTATCGGT
CGTTCTATGGCTTTGTTGTCCCCGGTTATGACAGCAATTTCTAGTGGTTTGACTCTAGCCATTTATTGGATTGGAGCCCA
CCTGATTGAAGATATTGCCATTCCCAAAGATCCAACCTTGATTGCTGGAGCGATGAAGGATAAAGTTAATCTTTTTTCAG
ATATGGTTGTTTACTCATCGTACGCCATGCAAGTTGTCATGGGCTTTATGATGATGATTGCTGTTTTCTTCATTTTGCCA
CGTGCCATTGTTTCATCAGGTCGTGTCAATGAAGTTTTGGAAACTGAGGGGTCAATACCTTATCCCGATAAAAGTCAGGC
TCAACCAAGTGAAAAAGGTTCTGTTGAGTTTGATAATGTTTCCTTCCGCTACAGCAAAAATTCAGAAGCAGTCCTAGAAC
ACGTCTCCTTTAAAGCGAAAGCTGGTCAAACGATTGCGTTCATCGGATCAACAGGCTCTGGAAAATCAACCTTGGTTAAC
CTCATACCACGTTTCTACGATGCGACGGAAGGTACTATTAAGGTTGATGGTGTGGACGTTCGCCAATACGATCACGACAC
ACTTCATAAAATTGTTGGTTATATTCCGCAAAAAGCTGTGCTCTTTAGTGGCGATGTTACCTCTAACATGGACATGGGAA
TCAGTAACAATTCCCCACTGGATGATGATAAAATCTGGGATGCTCTTGATTTAGCTCAAGGAAGAACATTTATTGAGATG
AAGGAAGGTAAGTTGAAAGCGCCAGTTGCTCAAGGCGGTTCAAACTTCTCTGGTGGTCAGAAACAGCGCTTGGCCATTGC
CCGTGCTTTAGCACGTAAACCTGAAATTATCATCTTTGATGATTCCTTCTCAGCACTTGATTACAAAACAGACCGAATCT
TACGTTCCCGCTTGAAAGAACGTACAGCTGACATGACCAAATTGATCGTTGCTCAGCGGATTTCAACCATTATGGATGCT
GATCAAATTTTAGTTCTTGATGAAGGTAAGGTTGTTGGACAAGGAACACACCAAGAACTCCTTGCTTCCAATGCAGTCTA
CCAAGAAATTGCCTATTCACAACTTTCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(16-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.281

100

0.664

Multiple sequence alignment