Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   ABZ559_RS02765 Genome accession   NZ_CP160400
Coordinates   544674..544844 (+) Length   56 a.a.
NCBI ID   WP_018376146.1    Uniprot ID   -
Organism   Streptococcus sp. ZY19097     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 539674..549844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZ559_RS02740 (ABZ559_02740) - 541029..541262 (+) 234 WP_367007170.1 hypothetical protein -
  ABZ559_RS02745 (ABZ559_02745) - 541839..542660 (+) 822 WP_018376149.1 hypothetical protein -
  ABZ559_RS02750 (ABZ559_02750) - 542653..542910 (+) 258 WP_367007171.1 hypothetical protein -
  ABZ559_RS02755 (ABZ559_02755) - 542861..543547 (+) 687 WP_367007172.1 hypothetical protein -
  ABZ559_RS02760 (ABZ559_02760) - 543550..544491 (+) 942 WP_367007173.1 hypothetical protein -
  ABZ559_RS02765 (ABZ559_02765) comE/blpR 544674..544844 (+) 171 WP_018376146.1 hypothetical protein Regulator
  ABZ559_RS02770 (ABZ559_02770) gshAB 544880..547135 (-) 2256 WP_367007174.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  ABZ559_RS02775 (ABZ559_02775) - 548205..549497 (+) 1293 WP_018376144.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6463.69 Da        Isoelectric Point: 10.2548

>NTDB_id=1020919 ABZ559_RS02765 WP_018376146.1 544674..544844(+) (comE/blpR) [Streptococcus sp. ZY19097]
MEKAIVLASSIKLKKLKIFGKPQQLLDAIMETGNQQFFFLDIEIKGQEKRENNVIK

Nucleotide


Download         Length: 171 bp        

>NTDB_id=1020919 ABZ559_RS02765 WP_018376146.1 544674..544844(+) (comE/blpR) [Streptococcus sp. ZY19097]
TTGGAAAAGGCTATTGTGTTGGCATCAAGCATTAAGCTTAAAAAACTGAAAATCTTCGGAAAACCGCAACAGTTGCTAGA
TGCTATTATGGAAACTGGCAATCAGCAGTTTTTCTTTTTAGATATTGAAATTAAAGGGCAAGAAAAAAGGGAAAATAATG
TTATCAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

61.702

83.929

0.518

Multiple sequence alignment