Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABV589_RS12835 Genome accession   NZ_CP160398
Coordinates   2850608..2851012 (-) Length   134 a.a.
NCBI ID   WP_003229093.1    Uniprot ID   -
Organism   Pseudomonas sp. HOU2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2845608..2856012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABV589_RS12820 (ABV589_12820) - 2847423..2849477 (-) 2055 WP_367086068.1 methyl-accepting chemotaxis protein -
  ABV589_RS12825 (ABV589_12825) - 2849632..2850171 (-) 540 WP_367086069.1 chemotaxis protein CheW -
  ABV589_RS12830 (ABV589_12830) pilH 2850182..2850547 (-) 366 WP_083367667.1 twitching motility response regulator PilH -
  ABV589_RS12835 (ABV589_12835) pilG 2850608..2851012 (-) 405 WP_003229093.1 twitching motility response regulator PilG Regulator
  ABV589_RS12840 (ABV589_12840) gshB 2851238..2852209 (+) 972 WP_367086070.1 glutathione synthase -
  ABV589_RS12845 (ABV589_12845) - 2852317..2853216 (+) 900 WP_007964106.1 energy transducer TonB -
  ABV589_RS12850 (ABV589_12850) - 2853430..2854002 (+) 573 WP_025109150.1 YqgE/AlgH family protein -
  ABV589_RS12855 (ABV589_12855) ruvX 2854002..2854439 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  ABV589_RS12860 (ABV589_12860) pyrR 2854521..2855027 (+) 507 WP_367086071.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14617.02 Da        Isoelectric Point: 6.7107

>NTDB_id=1020863 ABV589_RS12835 WP_003229093.1 2850608..2851012(-) (pilG) [Pseudomonas sp. HOU2]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLDAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1020863 ABV589_RS12835 WP_003229093.1 2850608..2851012(-) (pilG) [Pseudomonas sp. HOU2]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAGAATGTGGGCTGCGAAGTCATCACGGCCATCGACGGTTTCGACGCCCTGGCGAAGATCGCCGACCACCACCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGTGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAGCTGCTTGACGCGATTCAGGCCCACGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment