Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | AB1F75_RS20600 | Genome accession | NZ_CP160396 |
| Coordinates | 3998756..3999046 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain BSP1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3993756..4004046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB1F75_RS20585 (AB1F75_20585) | yabE | 3993952..3995265 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| AB1F75_RS20590 (AB1F75_20590) | dayD | 3995421..3996188 (-) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| AB1F75_RS20595 (AB1F75_20595) | metG | 3996267..3998261 (-) | 1995 | WP_015253011.1 | methionine--tRNA ligase | - |
| AB1F75_RS20600 (AB1F75_20600) | abrB | 3998756..3999046 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| AB1F75_RS20605 (AB1F75_20605) | rsmI | 3999095..3999973 (-) | 879 | WP_015253012.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| AB1F75_RS20610 (AB1F75_20610) | yazA | 3999948..4000247 (-) | 300 | WP_015253013.1 | GIY-YIG nuclease family protein | - |
| AB1F75_RS20615 (AB1F75_20615) | trmNF | 4000234..4000977 (-) | 744 | WP_015253014.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| AB1F75_RS20620 (AB1F75_20620) | yabA | 4001036..4001395 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| AB1F75_RS20625 (AB1F75_20625) | ricT | 4001410..4002237 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| AB1F75_RS20630 (AB1F75_20630) | holB | 4002240..4003229 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| AB1F75_RS20635 (AB1F75_20635) | yaaR | 4003241..4003681 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| AB1F75_RS20640 (AB1F75_20640) | darA | 4003694..4004023 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1020845 AB1F75_RS20600 WP_003226760.1 3998756..3999046(+) (abrB) [Bacillus subtilis subsp. subtilis strain BSP1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1020845 AB1F75_RS20600 WP_003226760.1 3998756..3999046(+) (abrB) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |