Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   AB1F75_RS18805 Genome accession   NZ_CP160396
Coordinates   3649783..3649923 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3644783..3654923
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS18800 (AB1F75_18800) - 3648665..3649837 (-) 1173 Protein_3689 condensation domain-containing protein -
  AB1F75_RS18805 (AB1F75_18805) comS 3649783..3649923 (-) 141 WP_010886404.1 competence protein ComS Regulator
  AB1F75_RS18810 (AB1F75_18810) srfAB 3649967..3653059 (-) 3093 Protein_3691 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=1020840 AB1F75_RS18805 WP_010886404.1 3649783..3649923(-) (comS) [Bacillus subtilis subsp. subtilis strain BSP1]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1020840 AB1F75_RS18805 WP_010886404.1 3649783..3649923(-) (comS) [Bacillus subtilis subsp. subtilis strain BSP1]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment