Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   AB1F75_RS16300 Genome accession   NZ_CP160396
Coordinates   3148996..3149790 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 3143996..3154790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS16265 (AB1F75_16265) ephM 3144838..3145698 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  AB1F75_RS16270 (AB1F75_16270) spdL 3145685..3146017 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  AB1F75_RS16275 (AB1F75_16275) yfhK 3146102..3146620 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  AB1F75_RS16280 (AB1F75_16280) yfhJ 3146765..3147034 (-) 270 WP_015252516.1 YfhJ family protein -
  AB1F75_RS16285 (AB1F75_16285) sspK 3147160..3147312 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AB1F75_RS16290 (AB1F75_16290) yfhI 3147344..3148537 (-) 1194 WP_003243500.1 MFS transporter -
  AB1F75_RS16295 (AB1F75_16295) yfhH 3148680..3148994 (-) 315 WP_003244592.1 YfhH family protein -
  AB1F75_RS16300 (AB1F75_16300) recX 3148996..3149790 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  AB1F75_RS16305 (AB1F75_16305) yfhF 3149879..3150790 (+) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  AB1F75_RS16310 (AB1F75_16310) yfhE 3150845..3150955 (+) 111 WP_003223230.1 YfhE family protein -
  AB1F75_RS16315 (AB1F75_16315) yfhD 3151022..3151213 (+) 192 WP_003233561.1 YfhD family protein -
  AB1F75_RS16320 (AB1F75_16320) yfhC 3151252..3151836 (-) 585 WP_015252518.1 NAD(P)H nitroreductase -
  AB1F75_RS16325 (AB1F75_16325) yfhB 3151924..3152805 (-) 882 WP_015252519.1 PhzF family phenazine biosynthesis isomerase -
  AB1F75_RS16330 (AB1F75_16330) sxzA 3152920..3153951 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1020836 AB1F75_RS16300 WP_003243354.1 3148996..3149790(-) (recX) [Bacillus subtilis subsp. subtilis strain BSP1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1020836 AB1F75_RS16300 WP_003243354.1 3148996..3149790(-) (recX) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment