Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   AB1F75_RS14660 Genome accession   NZ_CP160396
Coordinates   2844410..2845561 (-) Length   383 a.a.
NCBI ID   WP_044052564.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2839410..2850561
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS14635 (AB1F75_14635) cwlQ 2839548..2840282 (+) 735 WP_033883583.1 bifunctional muramidase/murein lytic transglycosylase -
  AB1F75_RS14640 (AB1F75_14640) bhbI 2840536..2840934 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  AB1F75_RS14645 (AB1F75_14645) spxH 2840931..2841830 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  AB1F75_RS14650 (AB1F75_14650) - 2842145..2842312 (+) 168 WP_003244944.1 hypothetical protein -
  AB1F75_RS14655 (AB1F75_14655) pepF 2842350..2844179 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  AB1F75_RS14660 (AB1F75_14660) coiA 2844410..2845561 (-) 1152 WP_044052564.1 competence protein CoiA Machinery gene
  AB1F75_RS14665 (AB1F75_14665) - 2845605..2845727 (+) 123 WP_003245684.1 hypothetical protein -
  AB1F75_RS14670 (AB1F75_14670) mecA 2845722..2846378 (-) 657 WP_015252354.1 adaptor protein MecA Regulator
  AB1F75_RS14675 (AB1F75_14675) - 2846345..2846485 (-) 141 WP_119122854.1 hypothetical protein -
  AB1F75_RS14680 (AB1F75_14680) yjbE 2846655..2847311 (+) 657 WP_015252355.1 TerC family protein -
  AB1F75_RS14685 (AB1F75_14685) spx 2847354..2847749 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  AB1F75_RS14690 (AB1F75_14690) yjbC 2847930..2848508 (-) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  AB1F75_RS14695 (AB1F75_14695) yjbB 2848672..2849889 (-) 1218 WP_080019554.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44918.04 Da        Isoelectric Point: 9.9417

>NTDB_id=1020824 AB1F75_RS14660 WP_044052564.1 2844410..2845561(-) (coiA) [Bacillus subtilis subsp. subtilis strain BSP1]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1020824 AB1F75_RS14660 WP_044052564.1 2844410..2845561(-) (coiA) [Bacillus subtilis subsp. subtilis strain BSP1]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963


Multiple sequence alignment