Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB1F75_RS13280 Genome accession   NZ_CP160396
Coordinates   2594863..2595327 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2589863..2600327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS13260 (AB1F75_13260) fadH 2591052..2591847 (-) 796 Protein_2614 2,4-dienoyl-CoA reductase -
  AB1F75_RS13265 (AB1F75_13265) ppeE 2591958..2592818 (+) 861 WP_003232400.1 metallophosphoesterase -
  AB1F75_RS13270 (AB1F75_13270) ltdD 2592875..2593369 (+) 495 WP_080019551.1 L,D-transpeptidase family protein -
  AB1F75_RS13275 (AB1F75_13275) ykuC 2593445..2594737 (+) 1293 WP_015252195.1 MFS transporter -
  AB1F75_RS13280 (AB1F75_13280) kre 2594863..2595327 (+) 465 WP_003232406.1 YkyB family protein Regulator
  AB1F75_RS13285 (AB1F75_13285) cheV 2595371..2596282 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  AB1F75_RS13290 (AB1F75_13290) - 2596486..2596647 (+) 162 WP_003245246.1 hypothetical protein -
  AB1F75_RS13295 (AB1F75_13295) dapX 2596849..2598030 (+) 1182 WP_015252196.1 aminotransferase A -
  AB1F75_RS13300 (AB1F75_13300) kinA 2598040..2599860 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1020820 AB1F75_RS13280 WP_003232406.1 2594863..2595327(+) (kre) [Bacillus subtilis subsp. subtilis strain BSP1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1020820 AB1F75_RS13280 WP_003232406.1 2594863..2595327(+) (kre) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment