Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB1F75_RS13165 Genome accession   NZ_CP160396
Coordinates   2575550..2576125 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSP1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2570550..2581125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F75_RS13140 (AB1F75_13140) mobB 2570945..2571466 (-) 522 WP_015252182.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AB1F75_RS13145 (AB1F75_13145) glp 2571427..2572719 (-) 1293 WP_015252183.1 gephyrin-like molybdotransferase Glp -
  AB1F75_RS13150 (AB1F75_13150) moeB 2572737..2573756 (-) 1020 WP_044052540.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB1F75_RS13155 (AB1F75_13155) mobA 2573807..2574406 (-) 600 WP_015252185.1 molybdenum cofactor guanylyltransferase -
  AB1F75_RS13160 (AB1F75_13160) cse15 2574543..2575508 (+) 966 WP_044052541.1 spore protein Cse15 -
  AB1F75_RS13165 (AB1F75_13165) rok 2575550..2576125 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AB1F75_RS13170 (AB1F75_13170) ykuV 2576591..2577037 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AB1F75_RS13175 (AB1F75_13175) ahpA 2577109..2577651 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AB1F75_RS13180 (AB1F75_13180) mscT 2577888..2578691 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AB1F75_RS13185 (AB1F75_13185) ykuS 2578728..2578973 (-) 246 WP_003232382.1 YkuS family protein -
  AB1F75_RS13190 (AB1F75_13190) dapI 2579035..2580159 (-) 1125 WP_015252188.1 N-acetyldiaminopimelate deacetylase -
  AB1F75_RS13195 (AB1F75_13195) dapD 2580229..2580939 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1020819 AB1F75_RS13165 WP_003232378.1 2575550..2576125(-) (rok) [Bacillus subtilis subsp. subtilis strain BSP1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1020819 AB1F75_RS13165 WP_003232378.1 2575550..2576125(-) (rok) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment