Detailed information NTG1020818

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AB1F75_RS13045
• Genome accession: NZ_CP160396
• Coordinates: 2551764..2552042 (-)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis subsp. subtilis strain BSP1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2546764..2557042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F75_RS13025 (AB1F75_13025)	ade	2546822..2548555 (-)	1734	WP_015252171.1	adenine deaminase	-
AB1F75_RS13030 (AB1F75_13030)	ktrC	2548711..2549376 (-)	666	WP_015252172.1	Ktr system potassium transporter KtrC	-
AB1F75_RS13035 (AB1F75_13035)	ykqA	2549439..2550272 (-)	834	WP_015252173.1	gamma-glutamylcyclotransferase	-
AB1F75_RS13040 (AB1F75_13040)	kinC	2550288..2551574 (-)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
AB1F75_RS13045 (AB1F75_13045)	abrB	2551764..2552042 (-)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
AB1F75_RS13050 (AB1F75_13050)	mreBH	2552326..2553333 (+)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
AB1F75_RS13055 (AB1F75_13055)	ykpC	2553434..2553568 (+)	135	WP_003238865.1	protein YkpC	-
AB1F75_RS13060 (AB1F75_13060)	ampS	2553677..2554909 (+)	1233	WP_003232341.1	aminopeptidase	-
AB1F75_RS13065 (AB1F75_13065)	panEB	2554943..2555854 (-)	912	WP_015252174.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=1020818 AB1F75_RS13045 WP_003244728.1 2551764..2552042(-) (abrB) [Bacillus subtilis subsp. subtilis strain BSP1]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=1020818 AB1F75_RS13045 WP_003244728.1 2551764..2552042(-) (abrB) [Bacillus subtilis subsp. subtilis strain BSP1]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576