Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABUE11_RS03555 Genome accession   NZ_CP160388
Coordinates   757696..758082 (+) Length   128 a.a.
NCBI ID   WP_367067709.1    Uniprot ID   -
Organism   Oryzisolibacter sp. LB2S     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 752696..763082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABUE11_RS03535 - 752994..753230 (+) 237 WP_367067705.1 Fis family transcriptional regulator -
  ABUE11_RS03540 purH 753476..755074 (+) 1599 WP_367067706.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  ABUE11_RS03545 hemL 755173..756477 (-) 1305 WP_367067707.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ABUE11_RS03550 - 756461..757396 (-) 936 WP_367067708.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ABUE11_RS03555 pilG 757696..758082 (+) 387 WP_367067709.1 response regulator Regulator
  ABUE11_RS03560 - 758094..758459 (+) 366 WP_367067710.1 response regulator -
  ABUE11_RS03565 - 758476..759003 (+) 528 WP_367067711.1 chemotaxis protein CheW -
  ABUE11_RS03570 - 759021..761264 (+) 2244 WP_367067712.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14334.47 Da        Isoelectric Point: 6.9235

>NTDB_id=1020753 ABUE11_RS03555 WP_367067709.1 757696..758082(+) (pilG) [Oryzisolibacter sp. LB2S]
MTTNDPVFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
GTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNTQ

Nucleotide


Download         Length: 387 bp        

>NTDB_id=1020753 ABUE11_RS03555 WP_367067709.1 757696..758082(+) (pilG) [Oryzisolibacter sp. LB2S]
ATGACGACAAATGATCCCGTATTCAGGGTACTCGTGGTGGATGACAGCAACACCATCAGGCGCAGTGCCGAAATCTTCCT
GAAACAGGGAGGGCATGAGGTCTTGCTGGCCGACGATGGCTTTGATGCCCTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTGATGCCCAAGCTCGATGGCTATCAGACCTGCGCCATCATCAAACGCAATGCGCGCTTTGCC
GGCACGCCGGTGGTGATGCTGTCGTCCAAGGACGGGGTGTTCGACAAGGCGCGCGGACGCATGGTGGGCTGTCAGGAATA
TCTCACCAAGCCGTTCACCAAGGATCAGTTGCTGCAGGCGGTGCAGCAATTCGGGAACACGCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.261

89.844

0.523

Multiple sequence alignment