Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   AB1F71_RS06995 Genome accession   NZ_CP160386
Coordinates   1444169..1444972 (-) Length   267 a.a.
NCBI ID   WP_002262928.1    Uniprot ID   A0AAX1K323
Organism   Streptococcus mutans strain UA159 ykuR deletion     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1439169..1449972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F71_RS06985 (AB1F71_06985) smc 1439831..1443367 (-) 3537 WP_002262926.1 chromosome segregation protein SMC -
  AB1F71_RS06990 (AB1F71_06990) rnc 1443367..1444062 (-) 696 WP_002262927.1 ribonuclease III -
  AB1F71_RS06995 (AB1F71_06995) vicX 1444169..1444972 (-) 804 WP_002262928.1 MBL fold metallo-hydrolase Regulator
  AB1F71_RS07000 (AB1F71_07000) vicK 1444969..1446321 (-) 1353 WP_002262929.1 cell wall metabolism sensor histidine kinase VicK Regulator
  AB1F71_RS07005 (AB1F71_07005) vicR 1446314..1447021 (-) 708 WP_002262930.1 response regulator YycF Regulator
  AB1F71_RS07010 (AB1F71_07010) - 1447374..1448156 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  AB1F71_RS07015 (AB1F71_07015) - 1448153..1448965 (+) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  AB1F71_RS07020 (AB1F71_07020) - 1448983..1449687 (+) 705 WP_002262933.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29693.77 Da        Isoelectric Point: 6.1184

>NTDB_id=1020682 AB1F71_RS06995 WP_002262928.1 1444169..1444972(-) (vicX) [Streptococcus mutans strain UA159 ykuR deletion]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1020682 AB1F71_RS06995 WP_002262928.1 1444169..1444972(-) (vicX) [Streptococcus mutans strain UA159 ykuR deletion]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGCTTTGTTATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

100

100

1

Multiple sequence alignment