Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   AB1F71_RS02040 Genome accession   NZ_CP160386
Coordinates   385518..386243 (+) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans strain UA159 ykuR deletion     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 380518..391243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB1F71_RS02015 (AB1F71_02015) - 381021..382451 (+) 1431 WP_002262613.1 solute carrier family 23 protein -
  AB1F71_RS02020 (AB1F71_02020) tsaE 382580..383023 (+) 444 WP_002272923.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AB1F71_RS02025 (AB1F71_02025) brpA 383354..384574 (+) 1221 WP_214495087.1 biofilm formation/cell division transcriptional regulator BrpA -
  AB1F71_RS02030 (AB1F71_02030) - 384744..385037 (-) 294 WP_002268777.1 hypothetical protein -
  AB1F71_RS02035 (AB1F71_02035) - 385034..385453 (-) 420 WP_002262609.1 HIT family protein -
  AB1F71_RS02040 (AB1F71_02040) pptA 385518..386243 (+) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  AB1F71_RS02045 (AB1F71_02045) pptB 386246..387280 (+) 1035 WP_002279713.1 ABC transporter permease Regulator
  AB1F71_RS02050 (AB1F71_02050) ccrZ 387339..388121 (+) 783 WP_002262606.1 cell cycle regulator CcrZ -
  AB1F71_RS02055 (AB1F71_02055) trmB 388131..388766 (+) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  AB1F71_RS02065 (AB1F71_02065) rimP 389038..389529 (+) 492 WP_002262604.1 ribosome maturation factor RimP -
  AB1F71_RS02070 (AB1F71_02070) nusA 389565..390758 (+) 1194 WP_002262603.1 transcription termination factor NusA -
  AB1F71_RS02075 (AB1F71_02075) - 390776..391072 (+) 297 WP_002263922.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=1020658 AB1F71_RS02040 WP_002262608.1 385518..386243(+) (pptA) [Streptococcus mutans strain UA159 ykuR deletion]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1020658 AB1F71_RS02040 WP_002262608.1 385518..386243(+) (pptA) [Streptococcus mutans strain UA159 ykuR deletion]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACGCCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCCTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759

Multiple sequence alignment