Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ABVF41_RS02530 Genome accession   NZ_CP160385
Coordinates   485449..486489 (+) Length   346 a.a.
NCBI ID   WP_002262039.1    Uniprot ID   -
Organism   Streptococcus mutans strain UA159-WCSS     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 480449..491489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABVF41_RS02500 (ABVF41_02500) - 480698..480901 (+) 204 WP_002263011.1 hypothetical protein -
  ABVF41_RS02505 (ABVF41_02505) - 480942..481175 (+) 234 WP_002263010.1 hypothetical protein -
  ABVF41_RS02510 (ABVF41_02510) - 481396..481962 (+) 567 WP_002279620.1 TetR/AcrR family transcriptional regulator -
  ABVF41_RS02515 (ABVF41_02515) - 482083..483858 (+) 1776 WP_002262036.1 oleate hydratase -
  ABVF41_RS02520 (ABVF41_02520) rsmD 484442..484981 (+) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ABVF41_RS02525 (ABVF41_02525) coaD 484971..485471 (+) 501 WP_002262038.1 pantetheine-phosphate adenylyltransferase -
  ABVF41_RS02530 (ABVF41_02530) sepM 485449..486489 (+) 1041 WP_002262039.1 S16 family serine protease SepM Regulator
  ABVF41_RS02535 (ABVF41_02535) - 486562..487893 (+) 1332 WP_002262040.1 metallophosphoesterase -
  ABVF41_RS02540 (ABVF41_02540) - 487890..488438 (+) 549 WP_002262041.1 YutD-like domain-containing protein -
  ABVF41_RS02545 (ABVF41_02545) rlmN 488435..489520 (+) 1086 WP_002262042.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ABVF41_RS02550 (ABVF41_02550) - 489520..490056 (+) 537 WP_002262043.1 VanZ family protein -

Sequence


Protein


Download         Length: 346 a.a.        Molecular weight: 37980.92 Da        Isoelectric Point: 10.1735

>NTDB_id=1020590 ABVF41_RS02530 WP_002262039.1 485449..486489(+) (sepM) [Streptococcus mutans strain UA159-WCSS]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSRNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=1020590 ABVF41_RS02530 WP_002262039.1 485449..486489(+) (sepM) [Streptococcus mutans strain UA159-WCSS]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAAGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGTTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCTCATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAGGAATTCAACATTCAAGGGTGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGCAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCTTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGTCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCCGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains


Predicted by InterproScan.

(131-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

100

100

1


Multiple sequence alignment