Detailed information NTG1020574

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: QRP18_RS23455
• Genome accession: NZ_CP160383
• Coordinates: 1610846..1611943 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain ST110-8
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1605846..1616943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRP18_RS23440 (QRP18_23440)	-	1606510..1607565 (-)	1056	WP_015313427.1	HlyD family secretion protein	-
QRP18_RS23445 (QRP18_23445)	-	1607603..1608058 (-)	456	WP_005477342.1	MarR family transcriptional regulator	-
QRP18_RS23450 (QRP18_23450)	luxQ	1608270..1610846 (-)	2577	WP_110176620.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
QRP18_RS23455 (QRP18_23455)	luxP	1610846..1611943 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
QRP18_RS23460 (QRP18_23460)	-	1612295..1612615 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
QRP18_RS23465 (QRP18_23465)	-	1612612..1613262 (-)	651	WP_110176618.1	YceH family protein	-
QRP18_RS23470 (QRP18_23470)	-	1613439..1613654 (-)	216	WP_285373010.1	hypothetical protein	-
QRP18_RS23475 (QRP18_23475)	-	1613982..1614296 (+)	315	WP_005453573.1	DUF496 family protein	-
QRP18_RS23480 (QRP18_23480)	-	1614419..1615756 (+)	1338	WP_025509085.1	MATE family efflux transporter	-
QRP18_RS23485 (QRP18_23485)	-	1615830..1616807 (-)	978	WP_025509086.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=1020574 QRP18_RS23455 WP_005463467.1 1610846..1611943(-) (luxP) [Vibrio parahaemolyticus strain ST110-8]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=1020574 QRP18_RS23455 WP_005463467.1 1610846..1611943(-) (luxP) [Vibrio parahaemolyticus strain ST110-8]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644