Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB0R67_RS05990 Genome accession   NZ_CP160237
Coordinates   1161563..1161739 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain JJ1216     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1156563..1166739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R67_RS05970 (AB0R67_05975) clpC 1156894..1159494 (+) 2601 WP_335446215.1 ATP-dependent chaperone ClpB Regulator
  AB0R67_RS05975 (AB0R67_05980) - 1159533..1159715 (-) 183 WP_001211116.1 YjzD family protein -
  AB0R67_RS05980 (AB0R67_05985) - 1159872..1160606 (+) 735 WP_000028691.1 hydrolase -
  AB0R67_RS05985 (AB0R67_05990) - 1160636..1161508 (+) 873 WP_001986101.1 NAD(P)-dependent oxidoreductase -
  AB0R67_RS05990 (AB0R67_05995) comZ 1161563..1161739 (+) 177 WP_001986215.1 ComZ family protein Regulator
  AB0R67_RS05995 (AB0R67_06000) fabH 1162130..1163062 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  AB0R67_RS06000 (AB0R67_06005) fabF 1163094..1164332 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  AB0R67_RS06005 (AB0R67_06010) - 1164439..1165227 (+) 789 WP_053565023.1 DUF2268 domain-containing putative Zn-dependent protease -
  AB0R67_RS06010 (AB0R67_06015) - 1165372..1166118 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=1020370 AB0R67_RS05990 WP_001986215.1 1161563..1161739(+) (comZ) [Bacillus thuringiensis strain JJ1216]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1020370 AB0R67_RS05990 WP_001986215.1 1161563..1161739(+) (comZ) [Bacillus thuringiensis strain JJ1216]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment