Detailed information NTG1020336

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: AB0R69_RS11655
• Genome accession: NZ_CP160234
• Coordinates: 2327612..2327890 (+)
• Length: 92 a.a.
• NCBI ID: WP_012009813.1
• Uniprot ID: A8FCR0
• Organism: Bacillus pumilus strain JJ1368
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2322612..2332890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R69_RS11635 (AB0R69_11635)	-	2322938..2324557 (+)	1620	WP_050945126.1	ATP-binding cassette domain-containing protein	-
AB0R69_RS11640 (AB0R69_11640)	-	2324784..2326016 (-)	1233	WP_335349098.1	aminopeptidase	-
AB0R69_RS11645 (AB0R69_11645)	-	2326123..2326254 (-)	132	WP_335349099.1	protein YkpC	-
AB0R69_RS11650 (AB0R69_11650)	mreBH	2326329..2327336 (-)	1008	WP_144523207.1	rod-share determining protein MreBH	-
AB0R69_RS11655 (AB0R69_11655)	abrB	2327612..2327890 (+)	279	WP_012009813.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
AB0R69_RS11660 (AB0R69_11660)	-	2328035..2329345 (+)	1311	WP_335349100.1	ATP-binding protein	-
AB0R69_RS11665 (AB0R69_11665)	-	2329350..2330186 (+)	837	WP_335349101.1	gamma-glutamylcyclotransferase	-
AB0R69_RS11670 (AB0R69_11670)	-	2330224..2330892 (+)	669	WP_144523204.1	TrkA family potassium uptake protein	-
AB0R69_RS11675 (AB0R69_11675)	ade	2331155..2332885 (+)	1731	WP_211063896.1	adenine deaminase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10291.94 Da
• Isoelectric Point: 4.5216

>NTDB_id=1020336 AB0R69_RS11655 WP_012009813.1 2327612..2327890(+) (abrB) [Bacillus pumilus strain JJ1368]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSMEFFIDGDKIVLKKYQPEGVCLMTGEITSENHDYGNGQITLSAEGAE
LLLKELQEALQQ

Nucleotide

• Length: 279 bp

>NTDB_id=1020336 AB0R69_RS11655 WP_012009813.1 2327612..2327890(+) (abrB) [Bacillus pumilus strain JJ1368]
TTGAAATCTATCGGAGTCGTAAGAAAAGTAGACGAACTAGGGCGTATTGTAATGCCAATCGAACTGAGAAGAGCACTTGA
TATTGCTATTAAAGACAGTATGGAATTTTTTATAGATGGGGATAAAATCGTCTTGAAAAAATACCAGCCAGAAGGTGTTT
GCCTCATGACTGGTGAGATTACATCAGAGAACCATGATTATGGAAATGGTCAAATTACATTAAGCGCTGAAGGCGCAGAA
CTACTATTAAAAGAGCTGCAAGAAGCTCTTCAGCAGTAA

Domains

Predicted by InterproScan.

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

• AbrB C-terminal domain (AbrB_C) (53-88)

3D structure

• AlphaFold DB: A8FCR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	54.348	100	0.543