Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB0R69_RS10215 Genome accession   NZ_CP160234
Coordinates   2067504..2067701 (+) Length   65 a.a.
NCBI ID   WP_144522752.1    Uniprot ID   -
Organism   Bacillus pumilus strain JJ1368     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2062504..2072701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R69_RS10185 (AB0R69_10185) - 2062913..2063092 (+) 180 WP_003211282.1 YjzC family protein -
  AB0R69_RS10190 (AB0R69_10190) - 2063263..2064528 (+) 1266 WP_335348886.1 MFS transporter -
  AB0R69_RS10195 (AB0R69_10195) - 2064643..2064837 (-) 195 WP_003211779.1 YjzD family protein -
  AB0R69_RS10200 (AB0R69_10200) - 2065049..2065789 (+) 741 WP_211063173.1 hypothetical protein -
  AB0R69_RS10205 (AB0R69_10205) - 2065865..2066440 (+) 576 WP_211063172.1 nad binding enzyme -
  AB0R69_RS10210 (AB0R69_10210) med 2066531..2067493 (+) 963 WP_211063171.1 BMP family ABC transporter substrate-binding protein Regulator
  AB0R69_RS10215 (AB0R69_10215) comZ 2067504..2067701 (+) 198 WP_144522752.1 ComZ family protein Regulator
  AB0R69_RS10220 (AB0R69_10220) - 2067712..2067945 (-) 234 WP_012009551.1 hypothetical protein -
  AB0R69_RS10225 (AB0R69_10225) - 2068115..2069053 (+) 939 WP_106041570.1 beta-ketoacyl-ACP synthase III -
  AB0R69_RS10230 (AB0R69_10230) fabF 2069075..2070316 (+) 1242 WP_012009553.1 beta-ketoacyl-ACP synthase II -
  AB0R69_RS10235 (AB0R69_10235) - 2070394..2071188 (+) 795 WP_144522753.1 DUF2268 domain-containing protein -
  AB0R69_RS10240 (AB0R69_10240) - 2071359..2072339 (+) 981 WP_211063170.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=1020327 AB0R69_RS10215 WP_144522752.1 2067504..2067701(+) (comZ) [Bacillus pumilus strain JJ1368]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLSLFTSVMQEAYELGKADAETEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=1020327 AB0R69_RS10215 WP_144522752.1 2067504..2067701(+) (comZ) [Bacillus pumilus strain JJ1368]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCAAAAGAAGAATTAGATAAAGC
TGGTATTCAGCTTGAGCCTGAGGCTCTTCAGCCGCTTTTATCATTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGAAACAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment