Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AB0R69_RS09810 | Genome accession | NZ_CP160234 |
| Coordinates | 1983969..1984547 (+) | Length | 192 a.a. |
| NCBI ID | WP_012009479.1 | Uniprot ID | A8FBP5 |
| Organism | Bacillus pumilus strain JJ1368 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1978969..1989547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R69_RS09790 (AB0R69_09790) | - | 1979462..1980757 (-) | 1296 | WP_144522800.1 | globin-coupled sensor protein | - |
| AB0R69_RS09795 (AB0R69_09795) | - | 1980849..1982381 (-) | 1533 | WP_335348918.1 | FAD-dependent oxidoreductase | - |
| AB0R69_RS09800 (AB0R69_09800) | - | 1982527..1983387 (+) | 861 | WP_335348917.1 | SDR family oxidoreductase | - |
| AB0R69_RS09805 (AB0R69_09805) | - | 1983450..1983680 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| AB0R69_RS09810 (AB0R69_09810) | comK | 1983969..1984547 (+) | 579 | WP_012009479.1 | competence protein ComK | Regulator |
| AB0R69_RS09815 (AB0R69_09815) | - | 1984707..1985813 (+) | 1107 | WP_211063209.1 | D-TA family PLP-dependent enzyme | - |
| AB0R69_RS09820 (AB0R69_09820) | - | 1986126..1986608 (+) | 483 | WP_144522804.1 | hypothetical protein | - |
| AB0R69_RS09825 (AB0R69_09825) | - | 1986616..1986876 (+) | 261 | WP_249407378.1 | hypothetical protein | - |
| AB0R69_RS09830 (AB0R69_09830) | - | 1986942..1987217 (+) | 276 | WP_224925116.1 | barstar family protein | - |
| AB0R69_RS09835 (AB0R69_09835) | ceuB | 1987383..1988333 (+) | 951 | WP_211063207.1 | ABC transporter permease | Machinery gene |
| AB0R69_RS09840 (AB0R69_09840) | - | 1988326..1989276 (+) | 951 | WP_211063206.1 | iron chelate uptake ABC transporter family permease subunit | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22332.40 Da Isoelectric Point: 8.7996
>NTDB_id=1020322 AB0R69_RS09810 WP_012009479.1 1983969..1984547(+) (comK) [Bacillus pumilus strain JJ1368]
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=1020322 AB0R69_RS09810 WP_012009479.1 1983969..1984547(+) (comK) [Bacillus pumilus strain JJ1368]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCACATAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATTTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCACATAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATTTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.979 |
100 |
0.62 |