Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AB0R69_RS08805 Genome accession   NZ_CP160234
Coordinates   1793938..1794729 (+) Length   263 a.a.
NCBI ID   WP_012009320.1    Uniprot ID   A8FB62
Organism   Bacillus pumilus strain JJ1368     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1788938..1799729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R69_RS08770 (AB0R69_08770) - 1789024..1789572 (+) 549 WP_144522561.1 thioredoxin family protein -
  AB0R69_RS08775 (AB0R69_08775) - 1789909..1790376 (+) 468 WP_144522560.1 thiol-disulfide oxidoreductase DCC family protein -
  AB0R69_RS08780 (AB0R69_08780) - 1790413..1791669 (-) 1257 WP_211063677.1 transcriptional regulator -
  AB0R69_RS08785 (AB0R69_08785) - 1791942..1792529 (+) 588 WP_335349660.1 nitroreductase -
  AB0R69_RS08790 (AB0R69_08790) - 1792567..1792722 (-) 156 WP_012009317.1 YfhD family protein -
  AB0R69_RS08795 (AB0R69_08795) - 1792784..1792894 (-) 111 WP_017358836.1 YfhE family protein -
  AB0R69_RS08800 (AB0R69_08800) - 1792947..1793843 (-) 897 WP_335349659.1 TIGR01777 family oxidoreductase -
  AB0R69_RS08805 (AB0R69_08805) recX 1793938..1794729 (+) 792 WP_012009320.1 recombination regulator RecX Regulator
  AB0R69_RS08810 (AB0R69_08810) - 1794733..1795047 (+) 315 WP_088001663.1 YfhH family protein -
  AB0R69_RS08815 (AB0R69_08815) - 1795070..1795243 (-) 174 WP_003217811.1 YpzG family protein -
  AB0R69_RS08820 (AB0R69_08820) - 1795269..1795418 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  AB0R69_RS08825 (AB0R69_08825) - 1795535..1795807 (+) 273 WP_012009323.1 YfhJ family protein -
  AB0R69_RS08830 (AB0R69_08830) - 1796098..1797081 (+) 984 WP_003217835.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30746.17 Da        Isoelectric Point: 6.7755

>NTDB_id=1020318 AB0R69_RS08805 WP_012009320.1 1793938..1794729(+) (recX) [Bacillus pumilus strain JJ1368]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIEDDHIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSTKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1020318 AB0R69_RS08805 WP_012009320.1 1793938..1794729(+) (recX) [Bacillus pumilus strain JJ1368]
ATGCCCTATATTACAAAAATCTCTGCTCAAAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTGGATCTAGATGTGCTCGTTCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGGATGAGATCAGTGAAGGAAGTC
ACTGATTATTTGACGAAAAAAGAAATCCCGGCACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTCGAATTTGCAGAAGCTTATGTCAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTTCTGAAAAAAG
AGCTAAAGCTCAAAGGAATAGAGGATGACCACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCACAAAAGAGATCGAGCAGCGCATCAAGCTACA
GTTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGCAAGGTAGGATACGACGGGTCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8FB62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment