Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB0R69_RS00500 Genome accession   NZ_CP160234
Coordinates   84185..86491 (-) Length   768 a.a.
NCBI ID   WP_211064042.1    Uniprot ID   -
Organism   Bacillus pumilus strain JJ1368     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 79185..91491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R69_RS00460 (AB0R69_00460) - 79597..80028 (+) 432 WP_044140818.1 Na(+)/H(+) antiporter subunit B -
  AB0R69_RS00465 (AB0R69_00465) - 80028..80369 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  AB0R69_RS00470 (AB0R69_00470) - 80362..81840 (+) 1479 WP_335349072.1 Na+/H+ antiporter subunit D -
  AB0R69_RS00475 (AB0R69_00475) - 81847..82326 (+) 480 WP_003213059.1 Na+/H+ antiporter subunit E -
  AB0R69_RS00480 (AB0R69_00480) - 82326..82607 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  AB0R69_RS00485 (AB0R69_00485) mnhG 82591..82965 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  AB0R69_RS00490 (AB0R69_00490) - 83050..83439 (-) 390 WP_211064043.1 hotdog fold thioesterase -
  AB0R69_RS00495 (AB0R69_00495) comA 83463..84104 (-) 642 WP_003213500.1 response regulator transcription factor Regulator
  AB0R69_RS00500 (AB0R69_00500) comP 84185..86491 (-) 2307 WP_211064042.1 ATP-binding protein Regulator
  AB0R69_RS00505 (AB0R69_00505) comX 86505..86675 (-) 171 WP_012011107.1 competence pheromone ComX -
  AB0R69_RS00510 (AB0R69_00510) - 86653..87576 (-) 924 WP_144522309.1 polyprenyl synthetase family protein -
  AB0R69_RS00515 (AB0R69_00515) degQ 87728..87868 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  AB0R69_RS00520 (AB0R69_00520) - 88416..88727 (+) 312 WP_213019770.1 inner spore coat protein -
  AB0R69_RS00525 (AB0R69_00525) - 88759..89985 (-) 1227 WP_211064153.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88622.17 Da        Isoelectric Point: 7.5606

>NTDB_id=1020297 AB0R69_RS00500 WP_211064042.1 84185..86491(-) (comP) [Bacillus pumilus strain JJ1368]
MRKLYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNEKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISSFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVVFDFLQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILGEVGKIIA
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDRELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDDGV
GFEASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=1020297 AB0R69_RS00500 WP_211064042.1 84185..86491(-) (comP) [Bacillus pumilus strain JJ1368]
ATGAGAAAGTTATATTCTAAGTTAACAGTTATATTAGTAATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAAGAAAATAGTCATGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTAAATGGGAATGAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTTACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCATCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCTTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCCTAGTGTATCAATTTATG
TCAAATAAGCTGTATAATGTTGATTTCTTTATGGGGAGGATTAAATACTACGGTTTTTTAGCGATTACACCAACAATACT
AGTGGTTGTTGTTTTTGATTTTCTTCAAAAACCGAATGCAAATTTCTATACAGTGAAATTTACAATCATCACGTACATTC
TTATGCTCACCGTTTTCTACTTTAAAGAAATTATCGATTTCCGCTTTCGTTTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTGTATTTAAATTTACACAGCTCATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATCGCG
CTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGGAC
ACCTAAGCTGACCCGCGATGAAATCTCATGGCTCAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTGATGTTT
GCGATGGAAGAAAAACAGCGCTCCGATTTAGCGAGGGATTTACATGATTCCGTGCTGCAGGATTTGATATCGCTGAAAAG
GCAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACCTCTATTGAACAATCGCTTATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACGACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTAGGTTTA
GTGAAGGCGATATCGAAGCTGACTTCTCAAATTCAGGAGGAAGCACCGTTTCATATTCGGCTGAATACGACACGCTTTGA
TAGGGAGCTGGACATTGATATTGACTCCCAGCTTAATATTTACCGGATTGTTCAGGAGCTGTTATCCAATGCCTTGAAAC
ATTCTCAAGCCAGCCAAGTGCTCGTAATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTT
GGTTTTGAGGCAAGCCACCTTGATCAGCACACCATGAGCATGGGTCTCTCTGGAATCAGAGAACGAGTCAAGGCGTTAAA
TGGGAAGCTGCACATTCATACAGCACCTGAAAAAGGGCTAAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.486

100

0.501


Multiple sequence alignment