Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AB0R75_RS05565 Genome accession   NZ_CP160232
Coordinates   1149217..1149882 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain JJ1622     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1144217..1154882
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R75_RS05535 (AB0R75_05535) - 1144569..1145630 (+) 1062 WP_144522764.1 ABC transporter ATP-binding protein -
  AB0R75_RS05540 (AB0R75_05540) - 1145623..1146552 (+) 930 WP_144522765.1 ATP-binding cassette domain-containing protein -
  AB0R75_RS05545 (AB0R75_05545) - 1146658..1146945 (+) 288 WP_217016710.1 hypothetical protein -
  AB0R75_RS05550 (AB0R75_05550) - 1147082..1147660 (+) 579 WP_012009571.1 GNAT family N-acetyltransferase -
  AB0R75_RS05555 (AB0R75_05555) spxA 1147853..1148248 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  AB0R75_RS05560 (AB0R75_05560) - 1148289..1148954 (-) 666 WP_144522767.1 TerC family protein -
  AB0R75_RS05565 (AB0R75_05565) mecA 1149217..1149882 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  AB0R75_RS05570 (AB0R75_05570) cls 1149968..1151488 (+) 1521 WP_211063123.1 cardiolipin synthase -
  AB0R75_RS05575 (AB0R75_05575) - 1151650..1152810 (+) 1161 WP_144522769.1 competence protein CoiA family protein -
  AB0R75_RS05580 (AB0R75_05580) pepF 1153025..1154851 (+) 1827 WP_284553825.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=1020254 AB0R75_RS05565 WP_012009573.1 1149217..1149882(+) (mecA) [Bacillus pumilus strain JJ1622]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1020254 AB0R75_RS05565 WP_012009573.1 1149217..1149882(+) (mecA) [Bacillus pumilus strain JJ1622]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTCGACCG
TGAAGAGATTTGGTATAATCGCGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCACTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCCCT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment