Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AB0R75_RS05035 | Genome accession | NZ_CP160232 |
| Coordinates | 1040851..1041429 (+) | Length | 192 a.a. |
| NCBI ID | WP_012009479.1 | Uniprot ID | A8FBP5 |
| Organism | Bacillus pumilus strain JJ1622 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1035851..1046429
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R75_RS05015 (AB0R75_05015) | - | 1036344..1037639 (-) | 1296 | WP_144522800.1 | globin-coupled sensor protein | - |
| AB0R75_RS05020 (AB0R75_05020) | - | 1037731..1039263 (-) | 1533 | WP_335348918.1 | FAD-dependent oxidoreductase | - |
| AB0R75_RS05025 (AB0R75_05025) | - | 1039409..1040269 (+) | 861 | WP_335348917.1 | SDR family oxidoreductase | - |
| AB0R75_RS05030 (AB0R75_05030) | - | 1040332..1040562 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| AB0R75_RS05035 (AB0R75_05035) | comK | 1040851..1041429 (+) | 579 | WP_012009479.1 | competence protein ComK | Regulator |
| AB0R75_RS05040 (AB0R75_05040) | - | 1041589..1042695 (+) | 1107 | WP_211063209.1 | D-TA family PLP-dependent enzyme | - |
| AB0R75_RS05045 (AB0R75_05045) | - | 1043008..1043490 (+) | 483 | WP_144522804.1 | hypothetical protein | - |
| AB0R75_RS05050 (AB0R75_05050) | - | 1043498..1043758 (+) | 261 | WP_249407378.1 | hypothetical protein | - |
| AB0R75_RS05055 (AB0R75_05055) | - | 1043824..1044099 (+) | 276 | WP_224925116.1 | barstar family protein | - |
| AB0R75_RS05060 (AB0R75_05060) | ceuB | 1044265..1045215 (+) | 951 | WP_211063207.1 | ABC transporter permease | Machinery gene |
| AB0R75_RS05065 (AB0R75_05065) | - | 1045208..1046158 (+) | 951 | WP_211063206.1 | iron chelate uptake ABC transporter family permease subunit | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22332.40 Da Isoelectric Point: 8.7996
>NTDB_id=1020246 AB0R75_RS05035 WP_012009479.1 1040851..1041429(+) (comK) [Bacillus pumilus strain JJ1622]
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=1020246 AB0R75_RS05035 WP_012009479.1 1040851..1041429(+) (comK) [Bacillus pumilus strain JJ1622]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCACATAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATTTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGAATATCACATAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATTTTTACAAATGAGCAAACCGTCAAACTCG
ATGTCTCATATAAATCTTTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.979 |
100 |
0.62 |