Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R72_RS07685 Genome accession   NZ_CP160229
Coordinates   1485695..1486291 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain AP46     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1480695..1491291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R72_RS07655 (AB0R72_07655) - 1480909..1481364 (+) 456 WP_033574618.1 flavodoxin -
  AB0R72_RS07660 (AB0R72_07660) dapD 1481446..1482156 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R72_RS07665 (AB0R72_07665) - 1482227..1483351 (+) 1125 WP_094032400.1 N-acetyldiaminopimelate deacetylase -
  AB0R72_RS07670 (AB0R72_07670) - 1483412..1483657 (+) 246 WP_003154596.1 YkuS family protein -
  AB0R72_RS07675 (AB0R72_07675) - 1483691..1484497 (-) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  AB0R72_RS07680 (AB0R72_07680) - 1484785..1485243 (+) 459 WP_094032401.1 redoxin domain-containing protein -
  AB0R72_RS07685 (AB0R72_07685) rok 1485695..1486291 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  AB0R72_RS07690 (AB0R72_07690) - 1486312..1487304 (-) 993 WP_012117448.1 hypothetical protein -
  AB0R72_RS07695 (AB0R72_07695) - 1487450..1488052 (+) 603 WP_094032402.1 molybdenum cofactor guanylyltransferase -
  AB0R72_RS07700 (AB0R72_07700) - 1488104..1489123 (+) 1020 WP_094032403.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R72_RS07705 (AB0R72_07705) glp 1489141..1490433 (+) 1293 WP_033574615.1 gephyrin-like molybdotransferase Glp -
  AB0R72_RS07710 (AB0R72_07710) mobB 1490394..1490915 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=1020189 AB0R72_RS07685 WP_012117447.1 1485695..1486291(+) (rok) [Bacillus velezensis strain AP46]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1020189 AB0R72_RS07685 WP_012117447.1 1485695..1486291(+) (rok) [Bacillus velezensis strain AP46]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCTGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment