Detailed information NTG1020168

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB0R72_RS02430
• Genome accession: NZ_CP160229
• Coordinates: 487620..488768 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AP46
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 482620..493768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R72_RS02410 (AB0R72_02410)	-	483021..483704 (-)	684	WP_094032071.1	ABC transporter ATP-binding protein	-
AB0R72_RS02415 (AB0R72_02415)	-	483719..485155 (-)	1437	WP_094032072.1	ABC transporter permease	-
AB0R72_RS02420 (AB0R72_02420)	-	485367..486050 (+)	684	WP_007410267.1	response regulator transcription factor	-
AB0R72_RS02425 (AB0R72_02425)	-	486037..487458 (+)	1422	WP_195182934.1	HAMP domain-containing sensor histidine kinase	-
AB0R72_RS02430 (AB0R72_02430)	rapC	487620..488768 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R72_RS02435 (AB0R72_02435)	phrC	488752..488871 (+)	120	WP_064115825.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB0R72_RS02440 (AB0R72_02440)	-	489020..489115 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
AB0R72_RS02445 (AB0R72_02445)	-	489210..490574 (-)	1365	WP_241457887.1	aspartate kinase	-
AB0R72_RS02450 (AB0R72_02450)	ceuB	490988..491941 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
AB0R72_RS02455 (AB0R72_02455)	-	491931..492878 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
AB0R72_RS02460 (AB0R72_02460)	-	492872..493630 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=1020168 AB0R72_RS02430 WP_007410270.1 487620..488768(+) (rapC) [Bacillus velezensis strain AP46]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1020168 AB0R72_RS02430 WP_007410270.1 487620..488768(+) (rapC) [Bacillus velezensis strain AP46]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568