Detailed information NTG1020150

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R86_RS16875
• Genome accession: NZ_CP160227
• Coordinates: 3416457..3417620 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ947
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3411457..3422620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R86_RS16845 (AB0R86_16845)	-	3411721..3412140 (-)	420	WP_335394693.1	TIGR03826 family flagellar region protein	-
AB0R86_RS16850 (AB0R86_16850)	comFC	3412214..3412903 (-)	690	WP_197061611.1	phosphoribosyltransferase family protein	Machinery gene
AB0R86_RS16855 (AB0R86_16855)	-	3412909..3413193 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R86_RS16860 (AB0R86_16860)	comFA	3413251..3414636 (-)	1386	WP_007407482.1	DEAD/DEAH box helicase	Machinery gene
AB0R86_RS16865 (AB0R86_16865)	-	3414745..3415593 (-)	849	WP_007407483.1	DegV family protein	-
AB0R86_RS16870 (AB0R86_16870)	degU	3415691..3416380 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R86_RS16875 (AB0R86_16875)	degS	3416457..3417620 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R86_RS16880 (AB0R86_16880)	-	3417843..3418490 (+)	648	WP_007407485.1	YigZ family protein	-
AB0R86_RS16885 (AB0R86_16885)	-	3418495..3419715 (+)	1221	WP_280581109.1	LCP family protein	-
AB0R86_RS16890 (AB0R86_16890)	-	3419814..3420890 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R86_RS16895 (AB0R86_16895)	-	3421023..3422219 (-)	1197	WP_007407487.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1020150 AB0R86_RS16875 WP_007407484.1 3416457..3417620(-) (degS) [Bacillus velezensis strain JJ947]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1020150 AB0R86_RS16875 WP_007407484.1 3416457..3417620(-) (degS) [Bacillus velezensis strain JJ947]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951