Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R86_RS07215 Genome accession   NZ_CP160227
Coordinates   1374118..1374714 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ947     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1369118..1379714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R86_RS07185 (AB0R86_07185) - 1369331..1369786 (+) 456 WP_038463794.1 flavodoxin -
  AB0R86_RS07190 (AB0R86_07190) dapD 1369868..1370578 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R86_RS07195 (AB0R86_07195) - 1370649..1371773 (+) 1125 WP_335394876.1 N-acetyldiaminopimelate deacetylase -
  AB0R86_RS07200 (AB0R86_07200) - 1371834..1372079 (+) 246 WP_003154596.1 YkuS family protein -
  AB0R86_RS07205 (AB0R86_07205) - 1372113..1372919 (-) 807 WP_038463800.1 mechanosensitive ion channel family protein -
  AB0R86_RS07210 (AB0R86_07210) - 1373207..1373665 (+) 459 WP_007409626.1 TlpA disulfide reductase family protein -
  AB0R86_RS07215 (AB0R86_07215) rok 1374118..1374714 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  AB0R86_RS07220 (AB0R86_07220) - 1374735..1375727 (-) 993 WP_007409627.1 hypothetical protein -
  AB0R86_RS07225 (AB0R86_07225) - 1375873..1376475 (+) 603 WP_020955749.1 molybdenum cofactor guanylyltransferase -
  AB0R86_RS07230 (AB0R86_07230) - 1376527..1377546 (+) 1020 WP_326254366.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R86_RS07235 (AB0R86_07235) glp 1377564..1378856 (+) 1293 WP_335394879.1 gephyrin-like molybdotransferase Glp -
  AB0R86_RS07240 (AB0R86_07240) mobB 1378817..1379338 (+) 522 WP_033574614.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=1020113 AB0R86_RS07215 WP_003154591.1 1374118..1374714(+) (rok) [Bacillus velezensis strain JJ947]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1020113 AB0R86_RS07215 WP_003154591.1 1374118..1374714(+) (rok) [Bacillus velezensis strain JJ947]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment