Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | AB0R86_RS05365 | Genome accession | NZ_CP160227 |
| Coordinates | 1034108..1034686 (+) | Length | 192 a.a. |
| NCBI ID | WP_003155179.1 | Uniprot ID | G1BIW7 |
| Organism | Bacillus velezensis strain JJ947 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1029108..1039686
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R86_RS05345 (AB0R86_05345) | - | 1029611..1030903 (-) | 1293 | WP_007409192.1 | globin-coupled sensor protein | - |
| AB0R86_RS05350 (AB0R86_05350) | - | 1031024..1032547 (-) | 1524 | WP_335395749.1 | FAD-dependent oxidoreductase | - |
| AB0R86_RS05355 (AB0R86_05355) | - | 1032672..1033529 (+) | 858 | WP_326245935.1 | SDR family oxidoreductase | - |
| AB0R86_RS05360 (AB0R86_05360) | - | 1033559..1033792 (-) | 234 | WP_007409189.1 | IDEAL domain-containing protein | - |
| AB0R86_RS05365 (AB0R86_05365) | comK | 1034108..1034686 (+) | 579 | WP_003155179.1 | competence protein ComK | Regulator |
| AB0R86_RS05370 (AB0R86_05370) | - | 1034832..1035200 (+) | 369 | WP_012117235.1 | iron chaperone | - |
| AB0R86_RS05375 (AB0R86_05375) | - | 1035227..1035598 (+) | 372 | WP_032866165.1 | iron chaperone | - |
| AB0R86_RS05380 (AB0R86_05380) | - | 1035646..1036857 (-) | 1212 | WP_007409185.1 | GNAT family N-acetyltransferase | - |
| AB0R86_RS05385 (AB0R86_05385) | - | 1037014..1037724 (-) | 711 | WP_007409183.1 | YrpD family protein | - |
| AB0R86_RS05390 (AB0R86_05390) | - | 1037920..1038189 (+) | 270 | WP_003155168.1 | excalibur calcium-binding domain-containing protein | - |
| AB0R86_RS05395 (AB0R86_05395) | - | 1038304..1039454 (+) | 1151 | WP_094246999.1 | IS3 family transposase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22315.58 Da Isoelectric Point: 8.1419
>NTDB_id=1020101 AB0R86_RS05365 WP_003155179.1 1034108..1034686(+) (comK) [Bacillus velezensis strain JJ947]
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
Nucleotide
Download Length: 579 bp
>NTDB_id=1020101 AB0R86_RS05365 WP_003155179.1 1034108..1034686(+) (comK) [Bacillus velezensis strain JJ947]
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTACGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCTGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGGGAGAGATATTAG
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTACGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCTGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGGGAGAGATATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
82.292 |
100 |
0.823 |