Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   AB0R86_RS01845 Genome accession   NZ_CP160227
Coordinates   355896..356060 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ947     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 350896..361060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R86_RS01840 (AB0R86_01840) srfAB 352787..355879 (+) 3093 Protein_322 surfactin non-ribosomal peptide synthetase SrfAB -
  AB0R86_RS01845 (AB0R86_01845) comS 355896..356060 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=1020091 AB0R86_RS01845 WP_269194677.1 355896..356060(+) (comS) [Bacillus velezensis strain JJ947]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=1020091 AB0R86_RS01845 WP_269194677.1 355896..356060(+) (comS) [Bacillus velezensis strain JJ947]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment