Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AB0R86_RS01810 Genome accession   NZ_CP160227
Coordinates   338421..338819 (-) Length   132 a.a.
NCBI ID   WP_020955304.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ947     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 333421..343819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R86_RS01785 (AB0R86_01785) - 333593..334795 (+) 1203 WP_042634803.1 GTP-binding protein -
  AB0R86_RS01790 (AB0R86_01790) - 334860..335996 (+) 1137 WP_061581750.1 zinc-dependent alcohol dehydrogenase -
  AB0R86_RS01795 (AB0R86_01795) - 336011..336445 (+) 435 WP_007409358.1 RDD family protein -
  AB0R86_RS01800 (AB0R86_01800) - 336517..336840 (+) 324 WP_015239126.1 YckD family protein -
  AB0R86_RS01805 (AB0R86_01805) - 336944..338380 (+) 1437 WP_007409356.1 family 1 glycosylhydrolase -
  AB0R86_RS01810 (AB0R86_01810) nin/comJ 338421..338819 (-) 399 WP_020955304.1 competence protein ComJ Regulator
  AB0R86_RS01815 (AB0R86_01815) nucA/comI 338840..339277 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AB0R86_RS01820 (AB0R86_01820) hxlB 339635..340192 (-) 558 WP_015239129.1 6-phospho-3-hexuloisomerase -
  AB0R86_RS01825 (AB0R86_01825) hxlA 340189..340824 (-) 636 WP_031378686.1 3-hexulose-6-phosphate synthase -
  AB0R86_RS01830 (AB0R86_01830) - 341057..341419 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.97 Da        Isoelectric Point: 4.9712

>NTDB_id=1020089 AB0R86_RS01810 WP_020955304.1 338421..338819(-) (nin/comJ) [Bacillus velezensis strain JJ947]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1020089 AB0R86_RS01810 WP_020955304.1 338421..338819(-) (nin/comJ) [Bacillus velezensis strain JJ947]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75

Multiple sequence alignment