Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R77_RS06765 Genome accession   NZ_CP160226
Coordinates   1327608..1328180 (+) Length   190 a.a.
NCBI ID   WP_024426871.1    Uniprot ID   -
Organism   Bacillus safensis strain JJ1244     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1322608..1333180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R77_RS06735 (AB0R77_06735) dapD 1322724..1323434 (+) 711 WP_008347987.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R77_RS06740 (AB0R77_06740) - 1323516..1324646 (+) 1131 WP_034281599.1 N-acetyldiaminopimelate deacetylase -
  AB0R77_RS06745 (AB0R77_06745) - 1324697..1324939 (+) 243 WP_024424725.1 YkuS family protein -
  AB0R77_RS06750 (AB0R77_06750) - 1324962..1325771 (-) 810 WP_024424726.1 mechanosensitive ion channel family protein -
  AB0R77_RS06755 (AB0R77_06755) ahpA 1326043..1326585 (+) 543 WP_003211758.1 biofilm-specific peroxidase AhpA -
  AB0R77_RS06760 (AB0R77_06760) - 1326668..1327126 (+) 459 WP_024424727.1 TlpA disulfide reductase family protein -
  AB0R77_RS06765 (AB0R77_06765) rok 1327608..1328180 (+) 573 WP_024426871.1 transcriptional regulator Rok Regulator
  AB0R77_RS06770 (AB0R77_06770) - 1328228..1329145 (-) 918 WP_046310808.1 hypothetical protein -
  AB0R77_RS06775 (AB0R77_06775) - 1329231..1329812 (+) 582 WP_046310811.1 molybdenum cofactor guanylyltransferase -
  AB0R77_RS06780 (AB0R77_06780) - 1329842..1330858 (+) 1017 WP_046310813.1 thiazole biosynthesis adenylyltransferase ThiF -
  AB0R77_RS06785 (AB0R77_06785) glp 1330868..1332145 (+) 1278 WP_046310815.1 gephyrin-like molybdotransferase Glp -
  AB0R77_RS06790 (AB0R77_06790) mobB 1332127..1332651 (+) 525 WP_034281948.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  AB0R77_RS06795 (AB0R77_06795) - 1332648..1333139 (+) 492 WP_034281605.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 190 a.a.        Molecular weight: 21543.50 Da        Isoelectric Point: 9.7309

>NTDB_id=1020046 AB0R77_RS06765 WP_024426871.1 1327608..1328180(+) (rok) [Bacillus safensis strain JJ1244]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQPQSSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTF
MQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 573 bp        

>NTDB_id=1020046 AB0R77_RS06765 WP_024426871.1 1327608..1328180(+) (rok) [Bacillus safensis strain JJ1244]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAGGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAGACGGATTCACTGCCTGTATTAGCTGAGCTTGCTGCGCAAGAAATGAGAAGCTACCAGCAG
CCGGCACAACCACAATCATCATCTTTAGGAACAGGACAGCTAAACGGTGCGCCTGTAGGTATTCCTGAAGGATCGACAAG
ACGCAGAAGAGGCACAGCTCGTCCTGGCTCTAAGGCAGCGAAGCTTCGTGAAGCTGCGATTAAAACGTTAAAGCGTCATA
ATGCAGCGATTAAAAGCTCAGAGCTTCAAAAAGAGATCGAAAAAGAGAGCGGTCTTGAAATCCCAAATATGACAACGTTT
ATGCAAAGCTTAATTAAAATGTACCCTGAAGTGAAGAAGCCTTATCGCGGACAGTATATTTTAGAAGGTGACATTCAAAC
AGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

81.283

98.421

0.8

Multiple sequence alignment