Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AB0R77_RS05460 Genome accession   NZ_CP160226
Coordinates   1089988..1090194 (+) Length   68 a.a.
NCBI ID   WP_046310543.1    Uniprot ID   -
Organism   Bacillus safensis strain JJ1244     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1084988..1095194
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R77_RS05430 (AB0R77_05430) - 1085404..1085583 (+) 180 WP_008348517.1 YjzC family protein -
  AB0R77_RS05435 (AB0R77_05435) - 1085747..1087012 (+) 1266 WP_046310541.1 MFS transporter -
  AB0R77_RS05440 (AB0R77_05440) - 1087125..1087319 (-) 195 WP_003211779.1 YjzD family protein -
  AB0R77_RS05445 (AB0R77_05445) - 1087532..1088272 (+) 741 WP_024425057.1 hypothetical protein -
  AB0R77_RS05450 (AB0R77_05450) - 1088346..1088921 (+) 576 WP_024426490.1 hypothetical protein -
  AB0R77_RS05455 (AB0R77_05455) med 1089013..1089975 (+) 963 WP_024425055.1 BMP family ABC transporter substrate-binding protein Regulator
  AB0R77_RS05460 (AB0R77_05460) comZ 1089988..1090194 (+) 207 WP_046310543.1 ComZ family protein Regulator
  AB0R77_RS05465 (AB0R77_05465) - 1090204..1090437 (-) 234 WP_034282082.1 hypothetical protein -
  AB0R77_RS05470 (AB0R77_05470) - 1090609..1091547 (+) 939 WP_034282079.1 beta-ketoacyl-ACP synthase III -
  AB0R77_RS05475 (AB0R77_05475) fabF 1091569..1092810 (+) 1242 WP_034282078.1 beta-ketoacyl-ACP synthase II -
  AB0R77_RS05480 (AB0R77_05480) - 1092888..1093691 (+) 804 WP_024425050.1 DUF2268 domain-containing protein -
  AB0R77_RS05485 (AB0R77_05485) - 1093841..1094821 (+) 981 WP_046310546.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 68 a.a.        Molecular weight: 7706.70 Da        Isoelectric Point: 4.0202

>NTDB_id=1020038 AB0R77_RS05460 WP_046310543.1 1089988..1090194(+) (comZ) [Bacillus safensis strain JJ1244]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLTLFTSVMQEAYELGKADAEDAESEKATE

Nucleotide


Download         Length: 207 bp        

>NTDB_id=1020038 AB0R77_RS05460 WP_046310543.1 1089988..1090194(+) (comZ) [Bacillus safensis strain JJ1244]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGACCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70

88.235

0.618

Multiple sequence alignment