Detailed information NTG1019971

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: DQM51_RS05145
• Genome accession: NZ_LS483356
• Coordinates: 966768..967838 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain NCTC8230
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 961768..972838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM51_RS05125 (NCTC8230_01020)	citX	962347..962925 (+)	579	WP_010922331.1	citrate lyase holo-[acyl-carrier protein] synthase	-
DQM51_RS05130 (NCTC8230_01021)	-	962940..964334 (+)	1395	WP_172452789.1	oxaloacetate decarboxylase subunit alpha	-
DQM51_RS05135 (NCTC8230_01022)	citC	964444..965496 (-)	1053	WP_023611459.1	[citrate (pro-3S)-lyase] ligase	-
DQM51_RS05140 (NCTC8230_01023)	-	965585..966067 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
DQM51_RS05145 (NCTC8230_01024)	xerS	966768..967838 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
DQM51_RS05150 (NCTC8230_01025)	-	968313..969011 (+)	699	WP_111713267.1	XRE family transcriptional regulator	-
DQM51_RS05155 (NCTC8230_01026)	ffh	969128..970690 (-)	1563	WP_002984594.1	signal recognition particle protein	-
DQM51_RS05160 (NCTC8230_01027)	-	970705..971037 (-)	333	WP_002989745.1	putative DNA-binding protein	-
DQM51_RS05165 (NCTC8230_01028)	-	971135..971833 (-)	699	WP_002989743.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=1019971 DQM51_RS05145 WP_002984598.1 966768..967838(-) (xerS) [Streptococcus pyogenes strain NCTC8230]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=1019971 DQM51_RS05145 WP_002984598.1 966768..967838(-) (xerS) [Streptococcus pyogenes strain NCTC8230]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCTAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806