Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   AB0R87_RS05690 Genome accession   NZ_CP160224
Coordinates   1168109..1168774 (+) Length   221 a.a.
NCBI ID   WP_050945278.1    Uniprot ID   -
Organism   Bacillus pumilus strain JJ950     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1163109..1173774
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R87_RS05660 (AB0R87_05660) - 1163432..1164520 (+) 1089 WP_095117782.1 ABC transporter ATP-binding protein -
  AB0R87_RS05665 (AB0R87_05665) - 1164522..1165442 (+) 921 WP_366597267.1 ATP-binding cassette domain-containing protein -
  AB0R87_RS05670 (AB0R87_05670) - 1165549..1165836 (+) 288 WP_050945281.1 hypothetical protein -
  AB0R87_RS05675 (AB0R87_05675) - 1165974..1166552 (+) 579 WP_366597269.1 GNAT family N-acetyltransferase -
  AB0R87_RS05680 (AB0R87_05680) spxA 1166746..1167141 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  AB0R87_RS05685 (AB0R87_05685) - 1167181..1167846 (-) 666 WP_050945279.1 TerC family protein -
  AB0R87_RS05690 (AB0R87_05690) mecA 1168109..1168774 (+) 666 WP_050945278.1 adaptor protein MecA Regulator
  AB0R87_RS05695 (AB0R87_05695) cls 1168860..1170380 (+) 1521 WP_366597271.1 cardiolipin synthase -
  AB0R87_RS05700 (AB0R87_05700) - 1170542..1171702 (+) 1161 WP_353759528.1 competence protein CoiA family protein -
  AB0R87_RS05705 (AB0R87_05705) pepF 1171917..1173743 (+) 1827 WP_284906233.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26391.15 Da        Isoelectric Point: 3.9851

>NTDB_id=1019904 AB0R87_RS05690 WP_050945278.1 1168109..1168774(+) (mecA) [Bacillus pumilus strain JJ950]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTSSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1019904 AB0R87_RS05690 WP_050945278.1 1168109..1168774(+) (mecA) [Bacillus pumilus strain JJ950]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCTCAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATATGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

76.923

100

0.769

Multiple sequence alignment