Detailed information NTG1019882

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AB0R64_RS17740
• Genome accession: NZ_CP160223
• Coordinates: 3581771..3582916 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JJ951
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576771..3587916

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R64_RS17720 (AB0R64_17720)	-	3577668..3578096 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
AB0R64_RS17725 (AB0R64_17725)	-	3578250..3578762 (+)	513	Protein_3430	bacteriocin biosynthesis protein AlbG	-
AB0R64_RS17730 (AB0R64_17730)	-	3578769..3580145 (-)	1377	WP_032875890.1	YncE family protein	-
AB0R64_RS17735 (AB0R64_17735)	-	3580185..3581540 (-)	1356	WP_032875887.1	YncE family protein	-
AB0R64_RS17740 (AB0R64_17740)	rapF	3581771..3582916 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
AB0R64_RS17745 (AB0R64_17745)	-	3582900..3583019 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
AB0R64_RS17750 (AB0R64_17750)	speB	3583142..3584014 (-)	873	WP_032875884.1	agmatinase	-
AB0R64_RS17755 (AB0R64_17755)	speE	3584073..3584903 (-)	831	WP_003151052.1	spermidine synthase	-
AB0R64_RS17760 (AB0R64_17760)	-	3585103..3587175 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
AB0R64_RS17765 (AB0R64_17765)	-	3587200..3587633 (-)	434	Protein_3438	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=1019882 AB0R64_RS17740 WP_074534220.1 3581771..3582916(+) (rapF) [Bacillus velezensis strain JJ951]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1019882 AB0R64_RS17740 WP_074534220.1 3581771..3582916(+) (rapF) [Bacillus velezensis strain JJ951]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541