Detailed information NTG1019878

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R64_RS16790
• Genome accession: NZ_CP160223
• Coordinates: 3395173..3396336 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ951
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390173..3401336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R64_RS16760 (AB0R64_16760)	-	3390437..3390856 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
AB0R64_RS16765 (AB0R64_16765)	comFC	3390930..3391619 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
AB0R64_RS16770 (AB0R64_16770)	-	3391625..3391909 (-)	285	WP_003151389.1	competence protein ComFB	-
AB0R64_RS16775 (AB0R64_16775)	comFA	3391967..3393352 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
AB0R64_RS16780 (AB0R64_16780)	-	3393461..3394309 (-)	849	WP_032876160.1	DegV family protein	-
AB0R64_RS16785 (AB0R64_16785)	degU	3394407..3395096 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R64_RS16790 (AB0R64_16790)	degS	3395173..3396336 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R64_RS16795 (AB0R64_16795)	-	3396559..3397206 (+)	648	WP_007614107.1	YigZ family protein	-
AB0R64_RS16800 (AB0R64_16800)	-	3397211..3398392 (+)	1182	WP_032876157.1	LCP family protein	-
AB0R64_RS16805 (AB0R64_16805)	-	3398491..3399567 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R64_RS16810 (AB0R64_16810)	-	3399700..3400896 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019878 AB0R64_RS16790 WP_007407484.1 3395173..3396336(-) (degS) [Bacillus velezensis strain JJ951]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019878 AB0R64_RS16790 WP_007407484.1 3395173..3396336(-) (degS) [Bacillus velezensis strain JJ951]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951