Detailed information NTG1019782

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: DQL39_RS04530
• Genome accession: NZ_LS483353
• Coordinates: 866197..868407 (-)
• Length: 736 a.a.
• NCBI ID: WP_038433222.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain NCTC4001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 861197..873407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL39_RS04500 (NCTC4001_00901)	-	861430..862536 (-)	1107	WP_011184448.1	NAD(P)/FAD-dependent oxidoreductase	-
DQL39_RS04505 (NCTC4001_00902)	-	862576..863364 (-)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
DQL39_RS04510 (NCTC4001_00903)	-	863354..864040 (-)	687	WP_038433223.1	tRNA (adenine(22)-N(1))-methyltransferase	-
DQL39_RS04515 (NCTC4001_00904)	nth	864112..864768 (-)	657	WP_002990106.1	endonuclease III	-
DQL39_RS04520 (NCTC4001_00905)	-	864765..865448 (-)	684	WP_011184446.1	DnaD domain-containing protein	-
DQL39_RS04525 (NCTC4001_00906)	-	865529..866047 (-)	519	WP_002990109.1	adenine phosphoribosyltransferase	-
DQL39_RS04530 (NCTC4001_00907)	recJ	866197..868407 (-)	2211	WP_038433222.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
DQL39_RS04535 (NCTC4001_00908)	-	868404..869168 (-)	765	WP_038433221.1	SDR family NAD(P)-dependent oxidoreductase	-
DQL39_RS04540 (NCTC4001_00909)	rnz	869168..870097 (-)	930	WP_002984894.1	ribonuclease Z	-
DQL39_RS04545 (NCTC4001_00910)	-	870112..870747 (-)	636	WP_038433220.1	cystathionine beta-lyase	-
DQL39_RS04550 (NCTC4001_00911)	hflX	870740..871978 (-)	1239	WP_038433219.1	GTPase HflX	-
DQL39_RS04555 (NCTC4001_00912)	miaA	872051..872950 (-)	900	WP_038433218.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
DQL39_RS04560 (NCTC4001_00913)	-	873084..873260 (+)	177	WP_002984898.1	DUF3042 family protein	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82545.43 Da
• Isoelectric Point: 4.7516

>NTDB_id=1019782 DQL39_RS04530 WP_038433222.1 866197..868407(-) (recJ) [Streptococcus pyogenes strain NCTC4001]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQGVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIITDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAQNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKYPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDAGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=1019782 DQL39_RS04530 WP_038433222.1 866197..868407(-) (recJ) [Streptococcus pyogenes strain NCTC4001]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTTATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTACGGCCCCAACCAGGGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTATAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCCAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGATCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAATATCCTTATTATTTGACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGCTGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	62.602	100	0.628
recJ	Bacillus subtilis subsp. subtilis str. 168	34.994	100	0.372