Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   AB0R82_RS07765 Genome accession   NZ_CP160220
Coordinates   1476287..1476862 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain JM553     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1471287..1481862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS07735 (AB0R82_07735) dapD 1471477..1472187 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  AB0R82_RS07740 (AB0R82_07740) dapI 1472257..1473381 (+) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  AB0R82_RS07745 (AB0R82_07745) ykuS 1473443..1473688 (+) 246 WP_003232382.1 YkuS family protein -
  AB0R82_RS07750 (AB0R82_07750) mscT 1473725..1474528 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  AB0R82_RS07755 (AB0R82_07755) ahpA 1474763..1475305 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  AB0R82_RS07760 (AB0R82_07760) ykuV 1475375..1475821 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  AB0R82_RS07765 (AB0R82_07765) rok 1476287..1476862 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  AB0R82_RS07770 (AB0R82_07770) cse15 1476903..1477868 (-) 966 WP_366592633.1 spore protein Cse15 -
  AB0R82_RS07775 (AB0R82_07775) mobA 1478005..1478604 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  AB0R82_RS07780 (AB0R82_07780) moeB 1478655..1479674 (+) 1020 WP_198878750.1 molybdopterin-synthase adenylyltransferase MoeB -
  AB0R82_RS07785 (AB0R82_07785) glp 1479692..1480984 (+) 1293 WP_198878751.1 gephyrin-like molybdotransferase Glp -
  AB0R82_RS07790 (AB0R82_07790) mobB 1480945..1481466 (+) 522 WP_088325787.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=1019686 AB0R82_RS07765 WP_003232378.1 1476287..1476862(+) (rok) [Bacillus subtilis strain JM553]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=1019686 AB0R82_RS07765 WP_003232378.1 1476287..1476862(+) (rok) [Bacillus subtilis strain JM553]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment