Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   AB0R82_RS07665 Genome accession   NZ_CP160220
Coordinates   1460444..1460908 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain JM553     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1455444..1465908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS07645 (AB0R82_07645) kinA 1455910..1457730 (+) 1821 WP_198878747.1 sporulation histidine kinase KinA -
  AB0R82_RS07650 (AB0R82_07650) dapX 1457741..1458922 (-) 1182 WP_014479654.1 aminotransferase A -
  AB0R82_RS07655 (AB0R82_07655) - 1459124..1459285 (-) 162 WP_003245246.1 hypothetical protein -
  AB0R82_RS07660 (AB0R82_07660) cheV 1459489..1460400 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  AB0R82_RS07665 (AB0R82_07665) kre 1460444..1460908 (-) 465 WP_003232406.1 YkyB family protein Regulator
  AB0R82_RS07670 (AB0R82_07670) ykuC 1461034..1462326 (-) 1293 WP_015252195.1 MFS transporter -
  AB0R82_RS07675 (AB0R82_07675) ltdD 1462402..1462896 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  AB0R82_RS07680 (AB0R82_07680) ppeE 1462953..1463813 (-) 861 WP_003232400.1 metallophosphoesterase -
  AB0R82_RS07685 (AB0R82_07685) fadH 1463956..1464720 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=1019685 AB0R82_RS07665 WP_003232406.1 1460444..1460908(-) (kre) [Bacillus subtilis strain JM553]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1019685 AB0R82_RS07665 WP_003232406.1 1460444..1460908(-) (kre) [Bacillus subtilis strain JM553]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment