Detailed information NTG1019676

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB0R82_RS06170
• Genome accession: NZ_CP160220
• Coordinates: 1189020..1189973 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain JM553
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1184020..1194973

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R82_RS06145 (AB0R82_06145)	argF	1185853..1186812 (+)	960	WP_198878861.1	ornithine carbamoyltransferase	-
AB0R82_RS06150 (AB0R82_06150)	yjzC	1186897..1187076 (+)	180	WP_003245356.1	YjzC family protein	-
AB0R82_RS06155 (AB0R82_06155)	yjzD	1187123..1187308 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AB0R82_RS06160 (AB0R82_06160)	-	1187557..1188291 (+)	735	WP_198878862.1	hypothetical protein	-
AB0R82_RS06165 (AB0R82_06165)	-	1188373..1188930 (+)	558	WP_038428783.1	hypothetical protein	-
AB0R82_RS06170 (AB0R82_06170)	med	1189020..1189973 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
AB0R82_RS06175 (AB0R82_06175)	comZ	1189988..1190179 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AB0R82_RS06180 (AB0R82_06180)	yjzB	1190209..1190448 (-)	240	WP_003232972.1	spore coat protein YjzB	-
AB0R82_RS06185 (AB0R82_06185)	fabH	1190613..1191551 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AB0R82_RS06190 (AB0R82_06190)	fabF	1191574..1192815 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AB0R82_RS06195 (AB0R82_06195)	yjaZ	1192892..1193677 (+)	786	WP_017695678.1	DUF2268 domain-containing protein	-
AB0R82_RS06200 (AB0R82_06200)	appD	1193869..1194855 (+)	987	WP_046160279.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1019676 AB0R82_RS06170 WP_014476425.1 1189020..1189973(+) (med) [Bacillus subtilis strain JM553]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1019676 AB0R82_RS06170 WP_014476425.1 1189020..1189973(+) (med) [Bacillus subtilis strain JM553]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997