Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AB0R82_RS04650 Genome accession   NZ_CP160220
Coordinates   908031..908825 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis strain JM553     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 903031..913825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R82_RS04620 (AB0R82_04620) sxzA 903870..904901 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  AB0R82_RS04625 (AB0R82_04625) yfhB 905017..905898 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  AB0R82_RS04630 (AB0R82_04630) yfhC 905986..906570 (+) 585 WP_003243940.1 nitroreductase -
  AB0R82_RS04635 (AB0R82_04635) yfhD 906609..906800 (-) 192 WP_003233561.1 YfhD family protein -
  AB0R82_RS04640 (AB0R82_04640) - 906867..906998 (-) 132 WP_041351182.1 YfhE family protein -
  AB0R82_RS04645 (AB0R82_04645) yfhF 907031..907942 (-) 912 WP_198878901.1 TIGR01777 family oxidoreductase -
  AB0R82_RS04650 (AB0R82_04650) recX 908031..908825 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  AB0R82_RS04655 (AB0R82_04655) yfhH 908827..909141 (+) 315 WP_038428648.1 YfhH family protein -
  AB0R82_RS04660 (AB0R82_04660) yfhI 909285..910478 (+) 1194 WP_003243500.1 MFS transporter -
  AB0R82_RS04665 (AB0R82_04665) sspK 910510..910662 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  AB0R82_RS04670 (AB0R82_04670) yfhJ 910787..911056 (+) 270 WP_003243789.1 YfhJ family protein -
  AB0R82_RS04675 (AB0R82_04675) yfhK 911201..911719 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  AB0R82_RS04680 (AB0R82_04680) spdL 911804..912121 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  AB0R82_RS04685 (AB0R82_04685) ephM 912123..912983 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=1019668 AB0R82_RS04650 WP_038428646.1 908031..908825(+) (recX) [Bacillus subtilis strain JM553]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1019668 AB0R82_RS04650 WP_038428646.1 908031..908825(+) (recX) [Bacillus subtilis strain JM553]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment