Detailed information NTG1019525

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AB0R89_RS05680
• Genome accession: NZ_CP160218
• Coordinates: 1163937..1164890 (+)
• Length: 317 a.a.
• NCBI ID: WP_007409125.1
• Uniprot ID: A7Z3B8
• Organism: Bacillus velezensis strain AP45
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1158937..1169890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R89_RS05655 (AB0R89_05655)	argF	1160756..1161727 (+)	972	WP_012117275.1	ornithine carbamoyltransferase	-
AB0R89_RS05660 (AB0R89_05660)	-	1161803..1161982 (+)	180	WP_003155070.1	YjzC family protein	-
AB0R89_RS05665 (AB0R89_05665)	-	1162019..1162204 (-)	186	WP_007409129.1	YjzD family protein	-
AB0R89_RS05670 (AB0R89_05670)	-	1162464..1163198 (+)	735	WP_025284552.1	hypothetical protein	-
AB0R89_RS05675 (AB0R89_05675)	-	1163281..1163847 (+)	567	WP_007409126.1	hypothetical protein	-
AB0R89_RS05680 (AB0R89_05680)	med	1163937..1164890 (+)	954	WP_007409125.1	BMP family ABC transporter substrate-binding protein	Regulator
AB0R89_RS05685 (AB0R89_05685)	comZ	1164903..1165094 (+)	192	WP_003155061.1	ComZ family protein	Regulator
AB0R89_RS05690 (AB0R89_05690)	-	1165123..1165341 (-)	219	WP_007409123.1	hypothetical protein	-
AB0R89_RS05695 (AB0R89_05695)	-	1165508..1166446 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
AB0R89_RS05700 (AB0R89_05700)	fabF	1166469..1167707 (+)	1239	WP_003155056.1	beta-ketoacyl-ACP synthase II	-
AB0R89_RS05705 (AB0R89_05705)	-	1167791..1168576 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
AB0R89_RS05710 (AB0R89_05710)	-	1168750..1169736 (+)	987	WP_012117279.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.99 Da
• Isoelectric Point: 4.6686

>NTDB_id=1019525 AB0R89_RS05680 WP_007409125.1 1163937..1164890(+) (med) [Bacillus velezensis strain AP45]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1019525 AB0R89_RS05680 WP_007409125.1 1163937..1164890(+) (med) [Bacillus velezensis strain AP45]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAACACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A7Z3B8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785