Detailed information NTG1019419

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R74_RS16730
• Genome accession: NZ_CP160216
• Coordinates: 3416643..3417806 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain JJ1043
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3411643..3422806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R74_RS16700 (AB0R74_16700)	-	3411907..3412326 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
AB0R74_RS16705 (AB0R74_16705)	comFC	3412400..3413089 (-)	690	WP_198161198.1	phosphoribosyltransferase family protein	Machinery gene
AB0R74_RS16710 (AB0R74_16710)	-	3413095..3413379 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R74_RS16715 (AB0R74_16715)	comFA	3413437..3414822 (-)	1386	WP_020956417.1	DEAD/DEAH box helicase	Machinery gene
AB0R74_RS16720 (AB0R74_16720)	-	3414931..3415779 (-)	849	WP_007407483.1	DegV family protein	-
AB0R74_RS16725 (AB0R74_16725)	degU	3415877..3416566 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R74_RS16730 (AB0R74_16730)	degS	3416643..3417806 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R74_RS16735 (AB0R74_16735)	-	3418029..3418676 (+)	648	WP_007407485.1	YigZ family protein	-
AB0R74_RS16740 (AB0R74_16740)	-	3418681..3419901 (+)	1221	WP_007407486.1	LCP family protein	-
AB0R74_RS16745 (AB0R74_16745)	-	3420000..3421076 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R74_RS16750 (AB0R74_16750)	-	3421209..3422405 (-)	1197	WP_366561137.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019419 AB0R74_RS16730 WP_007407484.1 3416643..3417806(-) (degS) [Bacillus velezensis strain JJ1043]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019419 AB0R74_RS16730 WP_007407484.1 3416643..3417806(-) (degS) [Bacillus velezensis strain JJ1043]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951