Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AB0R74_RS04375 Genome accession   NZ_CP160216
Coordinates   858252..859043 (+) Length   263 a.a.
NCBI ID   WP_053104682.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ1043     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 853252..864043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB0R74_RS04350 (AB0R74_04350) - 855248..856132 (+) 885 WP_015239425.1 PhzF family phenazine biosynthesis isomerase -
  AB0R74_RS04355 (AB0R74_04355) - 856209..856793 (+) 585 WP_007408549.1 nitroreductase -
  AB0R74_RS04360 (AB0R74_04360) - 856832..857023 (-) 192 WP_003155508.1 YfhD family protein -
  AB0R74_RS04365 (AB0R74_04365) - 857094..857204 (-) 111 WP_003155504.1 YfhE family protein -
  AB0R74_RS04370 (AB0R74_04370) - 857262..858161 (-) 900 WP_327992395.1 TIGR01777 family oxidoreductase -
  AB0R74_RS04375 (AB0R74_04375) recX 858252..859043 (+) 792 WP_053104682.1 recombination regulator RecX Regulator
  AB0R74_RS04380 (AB0R74_04380) - 859050..859364 (+) 315 WP_007408553.1 YfhH family protein -
  AB0R74_RS04385 (AB0R74_04385) - 859509..860702 (+) 1194 WP_076982912.1 MFS transporter -
  AB0R74_RS04390 (AB0R74_04390) - 860742..861131 (-) 390 WP_020955526.1 DUF2606 family protein -
  AB0R74_RS04395 (AB0R74_04395) - 861094..862005 (-) 912 WP_106080349.1 serine protease -
  AB0R74_RS04400 (AB0R74_04400) - 862151..862303 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  AB0R74_RS04405 (AB0R74_04405) - 862427..862696 (+) 270 WP_003155492.1 YfhJ family protein -
  AB0R74_RS04410 (AB0R74_04410) - 862828..863355 (+) 528 WP_106080348.1 SH3 domain-containing protein -
  AB0R74_RS04415 (AB0R74_04415) - 863441..863776 (+) 336 WP_003155488.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31051.27 Da        Isoelectric Point: 6.3788

>NTDB_id=1019365 AB0R74_RS04375 WP_053104682.1 858252..859043(+) (recX) [Bacillus velezensis strain JJ1043]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDEFDILEIQYGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNDKEFAEAYATTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDNIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1019365 AB0R74_RS04375 WP_053104682.1 858252..859043(+) (recX) [Bacillus velezensis strain JJ1043]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGTTTGACATTCTTGAAATCC
AGTACGGCGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGATATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATGACAAAGAATTTGCGGAAGCTTATGCGACCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGTGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATTCTGAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGTTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACAATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787

Multiple sequence alignment